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Single-cell RNA sequencing reveals molecular and functional platelet bias of aged haematopoietic stem cells.


Aged haematopoietic stem cells (HSCs) generate more myeloid cells and fewer lymphoid cells compared with young HSCs, contributing to decreased adaptive immunity in aged individuals. However, it is not known how intrinsic changes to HSCs and shifts in the balance between biased HSC subsets each contribute to the altered lineage output. Here, by analysing HSC transcriptomes and HSC function at the single-cell level, we identify increased molecular platelet priming and functional platelet bias as the predominant age-dependent change to HSCs, including a significant increase in a previously unrecognized class of HSCs that exclusively produce platelets. Depletion of HSC platelet programming through loss of the FOG-1 transcription factor is accompanied by increased lymphoid output. Therefore, increased platelet bias may contribute to the age-associated decrease in lymphopoiesis.

GSE70657 Samples



Cell Metadata and BAM Files

Dataset Metadata

BAM Files Run Accession Number Sample Accession Number Organism Organ/Tissue Dev. Stage Cell Type Sequencer Protocol Assay Type Library Layout Ontology Term Cell Cycle Phase
SRR2094048 SAMN03852482 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094049 SAMN03852483 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094050 SAMN03852484 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094051 SAMN03852485 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094052 SAMN03852486 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094053 SAMN03852487 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094054 SAMN03852488 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094055 SAMN03852489 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094056 SAMN03852490 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094057 SAMN03852491 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094058 SAMN03852492 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094059 SAMN03852493 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094060 SAMN03852494 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094061 SAMN03852495 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094062 SAMN03852496 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094063 SAMN03852497 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094064 SAMN03852498 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094065 SAMN03852499 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094066 SAMN03852500 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094067 SAMN03852501 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094068 SAMN03852502 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094069 SAMN03852503 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094070 SAMN03852504 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094071 SAMN03852505 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094072 SAMN03852506 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094073 SAMN03852507 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094074 SAMN03852508 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094075 SAMN03852509 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094076 SAMN03852510 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094077 SAMN03852452 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094078 SAMN03852453 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094079 SAMN03852454 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094080 SAMN03852455 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094081 SAMN03852456 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094082 SAMN03852457 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094083 SAMN03852458 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094084 SAMN03852459 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094085 SAMN03852460 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094086 SAMN03852461 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094087 SAMN03852462 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094088 SAMN03852463 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094089 SAMN03852464 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094090 SAMN03852465 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094091 SAMN03852466 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094092 SAMN03852467 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094093 SAMN03852468 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094094 SAMN03852469 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094095 SAMN03852470 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094096 SAMN03852471 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094097 SAMN03852472 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094098 SAMN03852473 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094099 SAMN03852474 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094100 SAMN03852475 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094101 SAMN03852476 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094102 SAMN03852477 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094103 SAMN03852478 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094104 SAMN03852479 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094105 SAMN03852480 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094106 SAMN03852481 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094107 SAMN03852422 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094108 SAMN03852423 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094109 SAMN03852424 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094110 SAMN03852425 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094111 SAMN03852426 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094112 SAMN03852427 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094113 SAMN03852428 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094114 SAMN03852429 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094115 SAMN03852430 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094116 SAMN03852431 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094117 SAMN03852432 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094118 SAMN03852433 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094119 SAMN03852434 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094120 SAMN03852435 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094121 SAMN03852436 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094122 SAMN03852437 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094123 SAMN03852438 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094124 SAMN03852439 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094125 SAMN03852440 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094126 SAMN03852441 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094127 SAMN03852442 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094128 SAMN03852443 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094129 SAMN03852444 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094130 SAMN03852445 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094131 SAMN03852446 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094132 SAMN03852447 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094133 SAMN03852451 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094134 SAMN03852376 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094135 SAMN03852377 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094136 SAMN03852378 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094137 SAMN03852379 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094138 SAMN03852448 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094139 SAMN03852449 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094140 SAMN03852450 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094141 SAMN03852380 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094142 SAMN03852381 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094143 SAMN03852382 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094144 SAMN03852383 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094145 SAMN03852384 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094146 SAMN03852385 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094147 SAMN03852386 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094148 SAMN03852387 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094149 SAMN03852388 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094150 SAMN03852389 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094151 SAMN03852390 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094152 SAMN03852391 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094153 SAMN03852392 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094154 SAMN03852393 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094155 SAMN03852394 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094156 SAMN03852395 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094157 SAMN03852396 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094158 SAMN03852397 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094159 SAMN03852398 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094160 SAMN03852399 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094161 SAMN03852400 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094162 SAMN03852402 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094163 SAMN03852403 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094164 SAMN03852404 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094165 SAMN03852405 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094166 SAMN03852406 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094167 SAMN03852407 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094168 SAMN03852401 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094169 SAMN03852408 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] S
SRR2094170 SAMN03852409 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094171 SAMN03852410 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094172 SAMN03852411 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094173 SAMN03852412 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094174 SAMN03852413 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M
SRR2094175 SAMN03852414 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094176 SAMN03852415 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094177 SAMN03852416 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094178 SAMN03852417 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094179 SAMN03852418 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2
SRR2094180 SAMN03852419 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] M.G1
SRR2094181 SAMN03852420 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G1.S
SRR2094182 SAMN03852421 Mus musculus Bone marrow Adult Hematopoietic stem cell Illumina HiSeq 2000 C1 Single-Cell mRNA Seq RNA-Seq Single-End XAO:0003055 [hematopoietic stem cell] G2.M

FASTQC Report

Bulk Download

FASTQC File ID Cell Accession Number FASTQC Report Link No. Sequence Tags
SRR2094048_1 SRR2094048 Preview 2224460
SRR2094049_1 SRR2094049 Preview 5471558
SRR2094050_1 SRR2094050 Preview 5164060
SRR2094051_1 SRR2094051 Preview 726909
SRR2094052_1 SRR2094052 Preview 5083214
SRR2094053_1 SRR2094053 Preview 1645053
SRR2094054_1 SRR2094054 Preview 5367858
SRR2094055_1 SRR2094055 Preview 2793649
SRR2094056_1 SRR2094056 Preview 13117
SRR2094057_1 SRR2094057 Preview 5959617
SRR2094058_1 SRR2094058 Preview 5593374
SRR2094059_1 SRR2094059 Preview 8225749
SRR2094060_1 SRR2094060 Preview 10022325
SRR2094061_1 SRR2094061 Preview 10215836
SRR2094062_1 SRR2094062 Preview 2006402
SRR2094063_1 SRR2094063 Preview 6589595
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Organism : Mus musculus

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File Size : 288M

Organism : Mus musculus

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Mouse Cell Data

Image Currently Unavailable
tSNE image.
Image Currently Unavailable
PCA image.
Image Currently Unavailable
Gene Body Coverage image.

Data Resources


Organism Run Metadata Link Data Repository Link Pubmed Record Link Author Provided Files DAVID Annotation Chart Link DAVID Annotation Table Link Gene Body Coverage Matrix Link PCA Matrix Link Krona Plot Img Link Unmapped Reads Link Expression Correlation
Mus musculus