SRR2094131_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2094131_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4544495
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

$Per Sequence quality graph$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTAT	10862	0.2390144559516514	No Hit
GTACATGGTAAGCAGTGGTATCAACGCAGAGTACATGGTAAGCAGTGGTAT	10442	0.22977250497580037	No Hit
ACCATGTACTCTGCGTTGATACCACTGCTTACCATGTACTCTGCGTTGATA	9635	0.21201475631505812	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	9562	0.2104084172168745	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8063	0.17742345409115864	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6672	0.14681499264494735	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTC	6229	0.13706693482994262	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGT	4864	0.10703059415842683	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4609	0.10141940963737445	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTTAG	95	0.005331676	14.2295685	1
GCGAATC	2215	0.0	14.22069	33
GGCGAAT	2215	0.0	14.22069	32
GCCCACG	2370	0.0	14.144576	18
TAAGGCG	2265	0.0	14.10497	29
TCTCGTA	2275	0.0	14.043743	38
CTCGTAT	2330	0.0	14.0014715	39
AGGCGAA	2340	0.0	13.845334	31
CACGAGA	2370	0.0	13.765462	21
TATGCCG	2305	0.0	13.762742	43
AATCTCG	2335	0.0	13.682575	36
ATCTCCG	2370	0.0	13.670227	10
CGAATCT	2335	0.0	13.586368	34
TAGCGCG	100	0.007559034	13.499053	29
CGAGACT	2355	0.0	13.471578	23
ACGAGAC	2410	0.0	13.444222	22
TCGTATG	2415	0.0	13.415503	40
AAGGCGA	2370	0.0	13.385137	30
CCCACGA	2515	0.0	13.328792	19
CCACGAG	2470	0.0	13.208157	20