Single Cell Transcriptome Datasets


Dataset Accession Number SRA Accession Number Dataset Title Organism Dataset Provider Organ Protocol Cell Count
GSE101601 SRP112900 STRT-seq-2i: dual-index 5' single cell and nucleus RNA-seq on an addressable microwell array Mus musculus and Homo sapiens Molecular Neurobiology Lab, Medical Biochemistry and Biophysics Department, Karolinska Institutet Brain (Somatosensory cortex), Brain (Middle temporal gyrus) STRT-seq-2i 4220
GSE63093 SRP049615 A secretagogin locus of the mammalian hypothalamus controls stress hormone release Mus musculus Lab of Molecular Neurobiology, Department Medical Biochemistry and Biophysics, Karolinska Institutet Brain (hypothalamic paraventricular nucleus) STRT-seq (C1) 151
GSE67602 SRP056902 Single-Cell Transcriptomics Reveals that Differentiation and Spatial Signatures Shape Epidermal and Hair Follicle Heterogeneity Mus musculus Lab of Molecular Neurobiology, Department Medical Biochemistry and Biophysics, Karolinska Institutet Epidermis STRT-seq (C1) 1422
GSE77288 SRP068957 Batch effects and the effective design of single-cell gene expression studies Homo sapiens Gilad Lab, Human Genetics Department, University of Chicago Blood STRT-seq (C1) 564