| DRA001287 |
DRP001358 |
Single-cell analysis of lung adenocarcinoma cell lines reveals diverse expression patterns of individual cells invoked by a molecular target drug treatment. |
Homo sapiens |
Laboratory of Functional Genomics, Department of Medical Genome Sciences, Graduate School of Frontier Sciences, The University of Tokyo |
337 |
| DRA002399 |
DRP002435 |
Single-cell RNA-seq analysis of the cell cycle. |
Homo sapiens |
RIKEN_CLST_DGT |
472 |
| DRA002730 |
DRP002586 |
Single cell analysis of lung adenocarcinoma cell lines and the response to an anti-cancer drug stimulation. |
Homo sapiens |
Laboratory of Functional Genomics, Department of Medical Genome Sciences, Graduate School of Frontier Sciences, The University of Tokyo |
255 |
| E-MTAB-2512 |
ERP005640 |
Single-Cell RNA Sequencing Reveals T Helper Cells Synthesizing Steroids De Novo to Contribute to Immune Homeostasis |
Mus musculus |
EMBL-EBI |
96 |
| E-MTAB-2600 |
ERP003293 |
Single cell mRNA -sequencing reveals cell-to-cell variation in three mouse ES cell culture conditions |
Mus musculus |
EMBL-EBI |
869 |
| E-MTAB-2805 |
ERP006670 |
Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells |
Mus musculus |
EMBL Wellcome Trust Genome Campus |
288 |
| E-MTAB-3346 |
ERP009633 |
Single-cell transcriptome analysis reveals coordinated ectopic gene-expression patterns in medullary thymic epithelial cells. |
Mus musculus |
EMBL Heidelberg |
341 |
| E-MTAB-3543 |
ERP010398 |
Th2 differentiation in a time course experiment and at single generation resolution. |
Mus musculus |
EMBL-EBI |
20 |
| E-MTAB-3857 |
ERP013319 |
T cell fate and clonality inference from single-cell transcriptomes. |
Mus musculus |
EMBL-EBI |
272 |
| E-MTAB-3929 |
ERP012552 |
Single-cell RNA-seq reveal lineage formation and X-chromosome dosage compensation in human preimplantation embryos. |
Homo sapiens |
Karolinska Institutet |
1529 |
| E-MTAB-4026 |
ERP010821 |
Single-cell RNA sequencing of mouse embryos with Tal1 (Scl) knockout. |
Mus musculus |
EMBL-EBI: The University of Cambridge |
768 |
| E-MTAB-4079 |
ERP013381 |
Mouse embryonic RNA-seq. |
Mus musculus |
EMBL-EBI: The University of Cambridge |
1205 |
| E-MTAB-4619 |
ERP015011 |
Single CD4+ cells after Nippostrongylus brasiliensis infection. |
Mus musculus |
EMBL-EBI |
287 |
| E-MTAB-5060 |
ERP017123 |
Whole-islet RNA-sequencing analysis of human pancreas from healthy individuals and type 2 diabetes patients. |
Homo sapiens |
Karolinska Institutet |
7 |
| E-MTAB-5061 |
ERP017126 |
Single-cell RNA-seq analysis of human pancreas from healthy individuals and type 2 diabetes patients. |
Homo sapiens |
Karolinska Institutet |
3514 |
| GSE29087 |
SRP006834 |
Characterization of the single-cell (ES and MEF) transcriptional landscape by highly multiplex RNA-Seq. |
Mus musculus |
Karolinska Institutet |
480 |
| GSE36552 |
SRP011546 |
Initiation of a conserved trophectoderm program in human, cow and mouse embryos. |
Homo sapiens |
Peking University |
124 |
| GSE38495 |
SRP014428 |
Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells. |
Mus musculus and Homo sapiens |
Karolinska Institutet |
121 |
| GSE41265 |
SRP015959 |
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells. |
Mus musculus |
New York Genome Center |
68 |
| GSE42268 |
SRP017173 |
Quartz-Seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity. |
Mus musculus |
RIKEN |
77 |
| GSE45719 |
SRP020490 |
Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells. |
Mus musculus |
Karolinska Institutet |
317 |
| GSE46980 |
SRP022764 |
Quantitative single-cell RNA-seq with unique molecular identifiers. |
Mus musculus |
Karolinska Institutet |
288 |
| GSE48968 |
SRP027537 |
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation. |
Mus musculus |
New York Genome Center |
4894 |
| GSE51254 |
SRP030617 |
Quantitative assessment of single-cell RNA-sequencing methods. |
Homo sapiens |
Stanford University |
109 |
| GSE52529 |
SRP033135 |
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells. |
Homo sapiens |
Harvard University |
372 |
| GSE53386 |
SRP034543 |
Single-cell RNA-seq transcriptome analysis of linear and circular RNAs in mouse preimplantation embryos. |
Mus musculus and Homo sapiens |
Peking University |
116 |
| GSE54695 |
SRP036633 |
Validation of noise models for single-cell transcriptomics. |
Mus musculus |
Max Planck Institute of Immunobiology and Epigenetics |
16 |
| GSE56638 |
SRP041119 |
Deep sequencing reveals cell-type-specific patterns of single-cell transcriptome variation. |
Mus musculus |
The University of Pennsylvania |
121 |
| GSE57872 |
SRP042161 |
Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma. |
Homo sapiens |
Massachusetts General Hospital |
875 |
| GSE59114 |
SRP044256 |
Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells. |
Mus musculus |
Broad Institute |
2128 |
| GSE59739 |
SRP044898 |
Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing. |
Mus musculus |
Karolinska Institutet |
2400 |
| GSE60361 |
SRP045452 |
A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA. |
Mus musculus |
Karolinska Institutet |
3492 |
| GSE63576 |
SRP050181 |
Somatosensory neuron types identified by high-coverage single-cell RNA-sequencing and functional heterogeneity. |
Mus musculus |
Shanghai Institute for Biological Sciences |
209 |
| GSE64016 |
SRP050992 |
Oscope identifies oscillatory genes in unsynchronized single-cell RNA-seq experiments. |
Homo sapiens |
Morgridge Institute for Research |
460 |
| GSE65360 |
SRP052977 |
Single-cell chromatin accessibility reveals principles of regulatory variation. |
Mus musculus and Homo sapiens |
Broad Institute |
1920 |
| GSE67310 |
SRP056585 |
Dissecting direct reprogramming from fibroblast to neuron using single-cell RNA-seq. |
Mus musculus |
Stanford University |
405 |
| GSE68981 |
SRP058443 |
Single cell transcriptomics reveals unanticipated features of early hematopoietic precursors. |
Mus musculus |
Yale University |
519 |
| GSE69405 |
SRP059035 |
Single-cell mRNA sequencing identifies subclonal heterogeneity in anti-cancer drug responses of lung adenocarcinoma cells. |
Homo sapiens |
Samsung Medical Center: Samsung Genome Institute |
201 |
| GSE70151 |
SRP059775 |
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets. |
Homo sapiens |
Harvard Medical School |
192 |
| GSE70245 |
SRP059903 |
Single-cell analysis of mixed-lineage states leading to a binary cell fate choice. |
Mus musculus |
Cincinnati Childrens Hospital Medical Center |
675 |
| GSE70580 |
SRP060416 |
The heterogeneity of human CD127(+) innate lymphoid cells revealed by single-cell RNA sequencing. |
Homo sapiens |
Uppsala University |
648 |
| GSE70657 |
SRP060557 |
Single-cell RNA sequencing reveals molecular and functional platelet bias of aged haematopoietic stem cells. |
Mus musculus |
Weatheral Institute of Molecular Medicine |
135 |
| GSE70798 |
SRP060883 |
Aire controls gene expression in the thymic epithelium with ordered stochasticity. |
Mus musculus |
Harvard Medical School |
310 |
| GSE71453 |
SRP061708 |
Single-cell RNA-seq reveals distinct injury responses in different types of DRG sensory neurons. |
Mus musculus |
University of California Los Angeles |
123 |
| GSE71485 |
SRP061746 |
Single-Cell RNA-Seq with Waterfall Reveals Molecular Cascades underlying Adult Neurogenesis. |
Mus musculus |
Johns Hopkins University |
173 |
| GSE71585 |
SRP061902 |
Adult mouse cortical cell taxonomy revealed by single cell transcriptomics. |
Mus musculus |
Allen Institute for Brain Science |
1809 |
| GSE73121 |
SRP063840 |
Application of single-cell RNA sequencing in optimizing a combinatorial therapeutic strategy in metastatic renal cell carcinoma. |
Homo sapiens |
Samsung Medical Center: Samsung Genome Institute |
121 |
| GSE73727 |
SRP064464 |
Artemisinins Target GABA A Receptor Signaling and Impair alpha Cell Identity. |
Homo sapiens |
Austrian Academy of Sciences: CeMM Research Center for Molecular Medicine |
72 |
| GSE74155 |
SRP064979 |
Single-cell analyses of X Chromosome inactivation dynamics and pluripotency during differentiation. |
Mus musculus |
Karolinska Institutet |
617 |
| GSE74672 |
SRP065796 |
Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes. |
Mus musculus |
Karolinska Institutet |
3077 |
| GSE74833 |
SRP066311 |
Simulating multiple faceted variability in single cell RNA sequencing. |
Mus musculus |
EECS-UC Berkeley |
768 |
| GSE75330 |
SRP066613 |
Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system. |
Mus musculus |
Karolinska Institutet |
6283 |
| GSE75386 |
SRP068021 |
Single-cell RNAseq reveals cell adhesion molecule profiles in electrophysiologically defined neurons. |
Mus musculus |
Stanford University |
108 |
| GSE75413 |
SRP066675 |
Single-cell transcriptomics reveals receptor transformations during olfactory neurogenesis. |
Mus musculus |
Fred Hutchinson Cancer Research Centre |
93 |
| GSE75659 |
SRP066963 |
Analysis of allelic expression patterns in clonal somatic cells by single-cell RNA-seq. |
Mus musculus and Homo sapiens |
Karolinska Institutet |
1318 |
| GSE75748 |
SRP067036 |
Single-cell RNA-seq reveals novel regulators of human embryonic stem cell differentiation to definitive endoderm. |
Homo sapiens |
Morgridge Institute for Research |
1776 |
| GSE76381 |
SRP067844 |
Molecular Diversity of Midbrain Development in Mouse, Human, and Stem Cells. |
Mus musculus and Homo sapiens |
Karolinska Institutet |
6665 |
| GSE77029 |
SRP068673 |
Distinct myeloid progenitor-differentiation pathways identified through single-cell RNA sequencing. |
Mus musculus |
Weatheral Institute of Molecular Medicine |
64 |
| GSE77067 |
SRP068706 |
Nuclear RNA-seq of single neurons reveals molecular signatures of activation. |
Mus musculus |
The Salk Institute for Biological Studies |
201 |
| GSE77980 |
SRP070425 |
Use of the Fluidigm C1 platform for RNA sequencing of single mouse pancreatic islet cells. |
Mus musculus |
Regeneron Pharmaceuticals Inc. |
622 |
| GSE78779 |
SRP070989 |
CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq. |
Mus musculus |
Technion - Israel Institute of Technology |
188 |
| GSE78845 |
SRP071085 |
Visceral motor neuron diversity delineates a cellular basis for nipple- and pilo-erection muscle control. |
Mus musculus |
Karolinska Institutet |
312 |
| GSE81682 |
SRP075481 |
A single-cell resolution map of mouse hematopoietic stem and progenitor cell differentiation. |
Mus musculus |
The University of Cambridge |
3840 |
| GSE86042 |
SRP082573 |
A Distinct Gene Module for Dysfunction Uncoupled from Activation in Tumor-Infiltrating T Cells. |
Mus musculus |
Broad Institute |
1604 |
| PRJEB8994 |
ERP010048 |
Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development. |
Homo sapiens |
EMBL-EBI |
372 |