| DRA001287 |
Single-cell analysis of lung adenocarcinoma cell lines reveals diverse expression patterns of individual cells invoked by a molecular target drug treatment. |
Homo sapiens |
Laboratory of Functional Genomics, Department of Medical Genome Sciences, Graduate School of Frontier Sciences, The University of Tokyo |
The University of Tokyo |
337 |
| DRA002399 |
Single-cell RNA-seq analysis of the cell cycle. |
Homo sapiens |
RIKEN Division of Genomic Technologies. |
RIKEN_CLST_DGT |
472 |
| DRA002730 |
Single cell analysis of lung adenocarcinoma cell lines and the response to an anti-cancer drug stimulation. |
Homo sapiens |
Laboratory of Functional Genomics The University of Tokyo |
UT-MGS |
255 |
| E-MTAB-2512 |
Single-Cell RNA Sequencing Reveals T Helper Cells Synthesizing Steroids De Novo to Contribute to Immune Homeostasis |
Mus musculus |
Wellcome Trust Genome Campus |
EMBL-EBI |
96 |
| E-MTAB-2600 |
Single cell mRNA -sequencing reveals cell-to-cell variation in three mouse ES cell culture conditions |
Mus musculus |
Wellcome Trust Genome Campus |
EMBL-EBI |
869 |
| E-MTAB-2805 |
Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells |
Mus musculus |
Helmholtz Zentrum München–German Research Center for Environmental Health, Institute of Computational Biology |
EMBL-EBI |
288 |
| E-MTAB-3346 |
Single-cell transcriptome analysis reveals coordinated ectopic gene-expression patterns in medullary thymic epithelial cells. |
Mus musculus |
EMBL Heidelberg |
EMBL Heidelberg |
341 |
| E-MTAB-3543 |
Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation. |
Mus musculus |
EMBL-EBI |
EMBL-EBI |
20 |
| E-MTAB-3857 |
T cell fate and clonality inference from single-cell transcriptomes. |
Mus musculus |
EMBL-EBI |
EMBL-EBI |
272 |
| E-MTAB-3929 |
Single-cell RNA-seq reveal lineage formation and X-chromosome dosage compensation in human preimplantation embryos. |
Homo sapiens |
Karolinska Institutet |
Karolinska Institutet |
1529 |
| E-MTAB-4026 |
Single-cell RNA sequencing of mouse embryos with Tal1 (Scl) knockout. |
Mus musculus |
The University of Cambridge |
EMBL-EBI |
768 |
| E-MTAB-4079 |
Mouse embryonic RNA-seq. |
Mus musculus |
The University of Cambridge |
EMBL-EBI |
1205 |
| E-MTAB-4619 |
Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation. |
Mus musculus |
EMBL-EBI |
EMBL-EBI |
287 |
| E-MTAB-5060 |
Whole-islet RNA-sequencing analysis of human pancreas from healthy individuals and type 2 diabetes patients. |
Homo sapiens |
Karolinska Institutet |
Karolinska Institutet |
7 |
| E-MTAB-5061 |
Single-cell RNA-seq analysis of human pancreas from healthy individuals and type 2 diabetes patients. |
Homo sapiens |
Karolinska Institutet |
Karolinska Institutet |
3514 |
| GSE29087 |
Characterization of the single-cell (ES and MEF) transcriptional landscape by highly multiplex RNA-Seq. |
Mus musculus |
Karolinska Institutet |
Karolinska Institutet |
480 |
| GSE36552 |
Initiation of a conserved trophectoderm program in human, cow and mouse embryos. |
Homo sapiens |
Peking University |
Peking University |
124 |
| GSE38495 |
Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells. |
Mus musculus and Homo sapiens |
Karolinska Institutet |
Karolinska Institutet |
121 |
| GSE41265 |
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells. |
Mus musculus |
New York Genome Center |
New York Genome Center |
68 |
| GSE42268 |
Quartz-Seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity. |
Mus musculus |
RIKEN |
RIKEN |
77 |
| GSE45719 |
Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells. |
Mus musculus |
Karolinska Institutet |
Karolinska Institutet |
317 |
| GSE46980 |
Quantitative single-cell RNA-seq with unique molecular identifiers. |
Mus musculus |
Karolinska Institutet |
Karolinska Institutet |
288 |
| GSE48968 |
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation. |
Mus musculus |
New York Genome Center |
New York Genome Center |
4894 |
| GSE51254 |
Quantitative assessment of single-cell RNA-sequencing methods. |
Homo sapiens |
Stanford University |
Stanford University |
109 |
| GSE52529 |
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells. |
Homo sapiens |
Harvard University |
Harvard University |
372 |
| GSE53386 |
Single-cell RNA-seq transcriptome analysis of linear and circular RNAs in mouse preimplantation embryos. |
Mus musculus and Homo sapiens |
Peking University |
Peking University |
116 |
| GSE54695 |
Validation of noise models for single-cell transcriptomics. |
Mus musculus |
Max Planck Institute of Immunobiology and Epigenetics |
Max Planck Institute of Immunobiology and Epigenetics |
16 |
| GSE56638 |
Deep sequencing reveals cell-type-specific patterns of single-cell transcriptome variation. |
Mus musculus |
The University of Pennsylvania |
The University of Pennsylvania |
121 |
| GSE57872 |
Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma. |
Homo sapiens |
Massachusetts General Hospital |
Massachusetts General Hospital |
875 |
| GSE59114 |
Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells. |
Mus musculus |
Broad Institute |
Broad Institute |
2128 |
| GSE59739 |
Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing. |
Mus musculus |
Karolinska Institutet |
Karolinska Institutet |
2400 |
| GSE60361 |
A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA. |
Mus musculus |
Karolinska Institutet |
Karolinska Institutet |
3492 |
| GSE63576 |
Somatosensory neuron types identified by high-coverage single-cell RNA-sequencing and functional heterogeneity. |
Mus musculus |
Shanghai Institute for Biological Sciences |
Chinese Academy of Sciences |
209 |
| GSE64016 |
Oscope identifies oscillatory genes in unsynchronized single-cell RNA-seq experiments. |
Homo sapiens |
Morgridge Institute for Research |
Morgridge Institute for Research |
460 |
| GSE65360 |
Single-cell chromatin accessibility reveals principles of regulatory variation. |
Mus musculus and Homo sapiens |
Broad Institute |
Broad Institute |
1920 |
| GSE67310 |
Dissecting direct reprogramming from fibroblast to neuron using single-cell RNA-seq. |
Mus musculus |
Stanford University |
Stanford University |
405 |
| GSE68981 |
Single cell transcriptomics reveals unanticipated features of early hematopoietic precursors. |
Mus musculus |
Yale University |
Yale University |
519 |
| GSE69405 |
Single-cell mRNA sequencing identifies subclonal heterogeneity in anti-cancer drug responses of lung adenocarcinoma cells. |
Homo sapiens |
Samsung Medical Center |
Samsung Genome Institute |
201 |
| GSE70151 |
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets. |
Homo sapiens |
Harvard Medical School |
Harvard Medical School |
192 |
| GSE70245 |
Single-cell analysis of mixed-lineage states leading to a binary cell fate choice. |
Mus musculus |
Cincinnati Childrens Hospital Medical Center |
Cincinnati Childrens Hospital Medical Center |
675 |
| GSE70580 |
The heterogeneity of human CD127(+) innate lymphoid cells revealed by single-cell RNA sequencing. |
Homo sapiens |
Uppsala University |
Uppsala University |
648 |
| GSE70657 |
Single-cell RNA sequencing reveals molecular and functional platelet bias of aged haematopoietic stem cells. |
Mus musculus |
Weatheral Institute of Molecular Medicine |
Weatheral Institute of Molecular Medicine |
135 |
| GSE70798 |
Aire controls gene expression in the thymic epithelium with ordered stochasticity. |
Mus musculus |
Harvard Medical School |
Harvard Medical School |
310 |
| GSE71453 |
Single-cell RNA-seq reveals distinct injury responses in different types of DRG sensory neurons. |
Mus musculus |
University of California Los Angeles |
University of California, Los Angeles |
123 |
| GSE71485 |
Single-Cell RNA-Seq with Waterfall Reveals Molecular Cascades underlying Adult Neurogenesis. |
Mus musculus |
Johns Hopkins University |
Johns Hopkins University |
173 |
| GSE71585 |
Adult mouse cortical cell taxonomy revealed by single cell transcriptomics. |
Mus musculus |
Allen Institute for Brain Science |
Allen Institute for Brain Science |
1809 |
| GSE73121 |
Application of single-cell RNA sequencing in optimizing a combinatorial therapeutic strategy in metastatic renal cell carcinoma. |
Homo sapiens |
Samsung Medical Center |
Samsung Genome Institute |
121 |
| GSE73727 |
Artemisinins Target GABA A Receptor Signaling and Impair alpha Cell Identity. |
Homo sapiens |
CeMM Research Center for Molecular Medicine |
Austrian Academy of Sciences |
72 |
| GSE74155 |
Single-cell analyses of X Chromosome inactivation dynamics and pluripotency during differentiation. |
Mus musculus |
Karolinska Institutet |
Karolinska Institutet |
617 |
| GSE74672 |
Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes. |
Mus musculus |
Karolinska Institutet |
Karolinska Institutet |
3077 |
| GSE74833 |
Simulating multiple faceted variability in single cell RNA sequencing. |
Mus musculus |
EECS-UC Berkeley |
UC Berkeley |
768 |
| GSE75330 |
Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system. |
Mus musculus |
Karolinska Institutet |
Karolinska Institutet |
6283 |
| GSE75386 |
Single-cell RNAseq reveals cell adhesion molecule profiles in electrophysiologically defined neurons. |
Mus musculus |
Stanford University |
Stanford University |
108 |
| GSE75413 |
Single-cell transcriptomics reveals receptor transformations during olfactory neurogenesis. |
Mus musculus |
Fred Hutchinson Cancer Research Centre |
Fred Hutchinson Cancer Research Centre |
93 |
| GSE75659 |
Analysis of allelic expression patterns in clonal somatic cells by single-cell RNA-seq. |
Mus musculus and Homo sapiens |
Karolinska Institutet |
Karolinska Institutet |
1318 |
| GSE75748 |
Single-cell RNA-seq reveals novel regulators of human embryonic stem cell differentiation to definitive endoderm. |
Homo sapiens |
Morgridge Institute for Research |
Morgridge Institute for Research |
1776 |
| GSE76381 |
Molecular Diversity of Midbrain Development in Mouse, Human, and Stem Cells. |
Mus musculus and Homo sapiens |
Karolinska Institutet |
Karolinska Institutet |
6665 |
| GSE77029 |
Distinct myeloid progenitor-differentiation pathways identified through single-cell RNA sequencing. |
Mus musculus |
Weatheral Institute of Molecular Medicine |
Weatheral Institute of Molecular Medicine |
64 |
| GSE77067 |
Nuclear RNA-seq of single neurons reveals molecular signatures of activation. |
Mus musculus |
The Salk Institute for Biological Studies |
The Salk Institute for Biological Studies |
201 |
| GSE77980 |
Use of the Fluidigm C1 platform for RNA sequencing of single mouse pancreatic islet cells. |
Mus musculus |
Regeneron Pharmaceuticals Inc. |
Regeneron Pharmaceuticals Inc. |
622 |
| GSE78779 |
CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq. |
Mus musculus |
Technion - Israel Institute of Technology |
Technion - Israel Institute of Technology |
188 |
| GSE78845 |
Visceral motor neuron diversity delineates a cellular basis for nipple- and pilo-erection muscle control. |
Mus musculus |
Karolinska Institutet |
Karolinska Institutet |
312 |
| GSE81682 |
A single-cell resolution map of mouse hematopoietic stem and progenitor cell differentiation. |
Mus musculus |
The University of Cambridge |
The University of Cambridge |
3840 |
| GSE86042 |
A Distinct Gene Module for Dysfunction Uncoupled from Activation in Tumor-Infiltrating T Cells. |
Mus musculus |
Broad Institute |
Broad Institute |
1604 |
| PRJEB8994 |
Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development. |
Homo sapiens |
European Nucleotide Archive |
EMBL-EBI |
372 |