FastQCFastQC Report
Sun 19 Mar 2023
SRR4895948_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895948_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences705221
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTTCTA708750.0141.824192
GTTCTAG225050.0141.556433
GTTCTAT236350.0140.819373
GTGTTCT715400.0140.505871
GTTCTAA176200.0140.475313
GTTCTAC76100.0139.634933
TTCTAGA56650.0137.63174
TTCTAGG78300.0136.712844
TCTAGAG16950.0136.651615
TTCTATG78250.0135.980484
TCTAGGT29300.0135.727455
TTCTAGT78950.0135.316454
TCTAGAT19700.0135.30275
TCTATAG21350.0134.526635
TCTATGA18900.0133.865195
TCTAGTG25550.0133.333155
TCTATGG27000.0133.299565
TCTAATG22900.0133.20165
TCTATCG7600.0133.160635
TCTAGTA21750.0133.03565