FastQCFastQC Report
Sun 19 Mar 2023
SRR4895833_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895833_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences829136
Sequences flagged as poor quality0
Sequence length151
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATTCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG133111.6054061094922907No Hit
ATCATTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC61650.7435450878987283No Hit
ATCATTCCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGC33310.40174350166920747No Hit
ATCATTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT23530.28378939040157464No Hit
ATCATTCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCG16150.19478107331004804No Hit
ATCATTCCATGTACTCTGCGTTGATACCACTGCTCCCCATGTACTCTGCG13100.1579957932112464No Hit
ATCATTCCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCG12330.14870901757974567No Hit
ATCATTCCTATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC11920.14376411107466083No Hit
ATCATTCCATGTACTCTGCGGTGATACCACTGCTTCCCATGTACTCTGCG9090.10963219544200227No Hit
ATCATTCCATGTACTCTGCGTGGATACCACTGCTTCCCATGTACTCTGCG8810.10625518612145655No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCATTC830350.0144.0151
CATTCCG252200.0143.974763
TCATTCC832450.0143.651692
ATTCCGT95800.0143.178224
CATTCCA257150.0142.829913
ATTCCGA66850.0142.829714
CATTCCT277550.0142.491243
ATTCCGG88400.0142.029484
ATTCCAT119750.0141.702794
ATTCCAG73050.0141.36924
ATTCCTG97150.0141.337084
ATTCCTA83550.0139.225864
TTCCGTA27100.0138.643785
TTCCGGA21050.0137.722845
TCCGGAT7500.0137.501286
TTCCGAT24050.0137.335375
TTCCGAG22400.0137.149295
TCCGTTA10400.0136.604466
TTCCTGA26800.0136.428515
TCCGAAT7950.0136.068056