Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895821_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 645598 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 11068 | 1.714379536491749 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCG | 1992 | 0.3085511417321615 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT | 1529 | 0.23683468660064003 | No Hit |
AACTCACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC | 961 | 0.14885424056456184 | No Hit |
AACTCACCATGTACTCTGCGTTGATACCACTGCTCCCCATGTACTCTGCG | 887 | 0.13739199935563617 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AACTCAC | 64770 | 0.0 | 143.7228 | 1 |
ACTCACC | 64810 | 0.0 | 143.63408 | 2 |
CTCACCG | 20620 | 0.0 | 143.25737 | 3 |
TCACCGT | 7370 | 0.0 | 142.63618 | 4 |
CTCACCT | 20790 | 0.0 | 142.39807 | 3 |
TCACCGA | 6070 | 0.0 | 142.18216 | 4 |
CTCACCA | 21685 | 0.0 | 142.17326 | 3 |
TCACCTG | 6970 | 0.0 | 142.13257 | 4 |
TCACCAT | 9850 | 0.0 | 141.71269 | 4 |
CACCATG | 5195 | 0.0 | 141.42567 | 5 |
TCACCTA | 6270 | 0.0 | 141.32663 | 4 |
TCACCAG | 6325 | 0.0 | 141.00964 | 4 |
TCACCGG | 7145 | 0.0 | 140.7705 | 4 |
ACCATGT | 3715 | 0.0 | 139.73761 | 6 |
CACCGTA | 2290 | 0.0 | 139.4787 | 5 |
CACCTGA | 1940 | 0.0 | 139.36996 | 5 |
CACCGAT | 2165 | 0.0 | 139.20602 | 5 |
CACCTAG | 2215 | 0.0 | 138.99327 | 5 |
ACCGTAT | 640 | 0.0 | 138.56859 | 6 |
CACCAGT | 2155 | 0.0 | 138.51369 | 5 |