FastQCFastQC Report
Sun 19 Mar 2023
SRR4895782_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895782_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1079532
Sequences flagged as poor quality0
Sequence length151
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCGAC1079750.0144.176712
ATAGCGA1080150.0144.12331
AGCGACT367550.0143.896223
AGCGACG351600.0143.69743
AGCGACA328750.0143.61793
GCGACAT124150.0143.396994
GCGACGT128100.0143.30954
GCGACTA111050.0143.10634
CGACTGA31900.0143.079935
CGACTAG35350.0142.986255
GCGACTG114200.0142.947314
GCGACTT141050.0142.880974
CGACGTA38050.0142.694085
GCGACAG107200.0142.595814
GCGACGA102900.0141.687484
CGACATG39300.0141.641465
CGACGAT36250.0141.425355
CGACATA38750.0141.418935
CGACTGT39450.0141.285695
CGACTAT41000.0141.220385
Produced by FastQC (version 0.11.5)