Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895743_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 607307 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTGAGCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 12757 | 2.10058504183222 | No Hit |
CTGAGCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGT | 1378 | 0.22690336189110286 | No Hit |
CTGAGCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTT | 1366 | 0.22492742550308162 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGAGCCA | 60810 | 0.0 | 144.01643 | 2 |
CTGAGCC | 60840 | 0.0 | 143.94543 | 1 |
GAGCCAT | 22855 | 0.0 | 143.92223 | 3 |
GAGCCAG | 19940 | 0.0 | 143.48296 | 3 |
AGCCATG | 9520 | 0.0 | 143.22154 | 4 |
GCCATAG | 2145 | 0.0 | 143.19774 | 5 |
AGCCAGT | 6915 | 0.0 | 142.95491 | 4 |
GAGCCAA | 17115 | 0.0 | 142.68953 | 3 |
AGCCATA | 6390 | 0.0 | 142.5136 | 4 |
AGCCAAT | 6380 | 0.0 | 142.39793 | 4 |
GCCATGA | 1890 | 0.0 | 141.91718 | 5 |
AGCCATT | 6890 | 0.0 | 141.90388 | 4 |
GCCAGAT | 2120 | 0.0 | 141.14517 | 5 |
GCCATGT | 5260 | 0.0 | 140.91629 | 5 |
AGCCAGG | 7160 | 0.0 | 140.27875 | 4 |
GCCAGTA | 2010 | 0.0 | 140.26022 | 5 |
AGCCAGA | 6010 | 0.0 | 140.12712 | 4 |
GCCATAT | 2180 | 0.0 | 139.90643 | 5 |
AGCCAAG | 5805 | 0.0 | 139.61044 | 4 |
GCCAATG | 2175 | 0.0 | 139.56505 | 5 |