Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895583_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1636713 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CACCTTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | 1693 | 0.10343902687887246 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACCTTAC | 164210 | 0.0 | 143.45164 | 2 |
CACCTTA | 164560 | 0.0 | 143.14653 | 1 |
CCTTACG | 45140 | 0.0 | 142.93654 | 3 |
CTTACGT | 16150 | 0.0 | 141.87524 | 4 |
CTTACGA | 11305 | 0.0 | 141.63335 | 4 |
CCTTACT | 50600 | 0.0 | 141.46455 | 3 |
CCTTACA | 41670 | 0.0 | 141.35178 | 3 |
CTTACTA | 13610 | 0.0 | 141.33408 | 4 |
CTTACTG | 15285 | 0.0 | 141.14719 | 4 |
CTTACGG | 13385 | 0.0 | 140.96794 | 4 |
CTTACAG | 12525 | 0.0 | 140.47765 | 4 |
TTACGTA | 4645 | 0.0 | 138.96736 | 5 |
CCTTACC | 29255 | 0.0 | 138.6363 | 3 |
CTTACGC | 4875 | 0.0 | 138.02032 | 4 |
TTACGGT | 4915 | 0.0 | 137.62914 | 5 |
CTTACCG | 7330 | 0.0 | 137.54355 | 4 |
TTACGAT | 4335 | 0.0 | 137.2848 | 5 |
TTACGTG | 4760 | 0.0 | 137.12177 | 5 |
TTACGGA | 3510 | 0.0 | 136.33916 | 5 |
TTACTGA | 4055 | 0.0 | 136.2939 | 5 |