FastQCFastQC Report
Sat 18 Mar 2023
SRR4895542_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4895542_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89850
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAAGG100.0072282134144.000028
CATGGAT100.0072282134144.000028
GCAAGTC100.0072282134144.000027
GAGCTAG3200.0144.000025
CTATAAG202.194247E-6144.000028
CGTTGAA202.194247E-6144.000028
CTAAGAT100.0072282134144.000028
CGTGTTA100.0072282134144.000028
GAGCAGT2750.0144.000025
CGATGAT202.194247E-6144.000028
GCGGAGA202.194247E-6144.000027
AGCTAGT800.0144.000026
GCATGTA400.0144.000027
GCATGGA400.0144.000027
CTGATGA100.0072282134144.000028
CAGAGTT100.0072282134144.000028
CAATAGT100.0072282134144.000028
CGATAGG100.0072282134144.000028
AGCAGAT400.0144.000026
GCGTAAG202.194247E-6144.000027