Basic Statistics
Measure | Value |
---|---|
Filename | SRR4895542_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 89850 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTTAAGG | 10 | 0.0072282134 | 144.00002 | 8 |
CATGGAT | 10 | 0.0072282134 | 144.00002 | 8 |
GCAAGTC | 10 | 0.0072282134 | 144.00002 | 7 |
GAGCTAG | 320 | 0.0 | 144.00002 | 5 |
CTATAAG | 20 | 2.194247E-6 | 144.00002 | 8 |
CGTTGAA | 20 | 2.194247E-6 | 144.00002 | 8 |
CTAAGAT | 10 | 0.0072282134 | 144.00002 | 8 |
CGTGTTA | 10 | 0.0072282134 | 144.00002 | 8 |
GAGCAGT | 275 | 0.0 | 144.00002 | 5 |
CGATGAT | 20 | 2.194247E-6 | 144.00002 | 8 |
GCGGAGA | 20 | 2.194247E-6 | 144.00002 | 7 |
AGCTAGT | 80 | 0.0 | 144.00002 | 6 |
GCATGTA | 40 | 0.0 | 144.00002 | 7 |
GCATGGA | 40 | 0.0 | 144.00002 | 7 |
CTGATGA | 10 | 0.0072282134 | 144.00002 | 8 |
CAGAGTT | 10 | 0.0072282134 | 144.00002 | 8 |
CAATAGT | 10 | 0.0072282134 | 144.00002 | 8 |
CGATAGG | 10 | 0.0072282134 | 144.00002 | 8 |
AGCAGAT | 40 | 0.0 | 144.00002 | 6 |
GCGTAAG | 20 | 2.194247E-6 | 144.00002 | 7 |