SRR6792048_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6792048_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	84213772
Sequences flagged as poor quality	0
Sequence length	151
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	11173149	13.26760307090864	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	1119538	1.3294001365952353	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA	720816	0.8559360100863312	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	444437	0.5277485967497098	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG	340346	0.404145298229843	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA	301198	0.3576588399341618	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC	260628	0.3094838217198014	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA	219694	0.26087657016479443	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA	157869	0.18746221223768483	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG	151099	0.17942314708335355	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	120840	0.14349196946076706	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT	109094	0.12954413204529064	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGAGCACACGTCTGAACTC	91084	0.10815808131715084	Illumina Multiplexing PCR Primer 2.01 (100% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGTACC	45620	87.99254	145
AAGCAGT	8579785	71.97143	1
AGTGGTA	8584315	71.83582	5
GTATCAA	8594095	71.83463	9
GGTATCA	8690720	70.956795	8
GTGGTAT	8698120	70.8801	6
TGGTATC	8716160	70.72823	7
AGCAGTG	8734900	70.633385	2
CAGTGGT	8740210	70.56355	4
GCAGTGG	8894405	69.32998	3
CGTGGGG	57655	49.153587	145
CAGGGGG	96340	42.65302	145
CCCTCTT	151300	40.20218	145
TGCGGAT	15020	38.710697	145
CAGGGGA	239535	35.971355	145
CGTGGGA	179385	32.4935	145
TGACTGG	52300	30.398302	2
CGGGGGA	62065	29.798218	145
GTGACTG	55680	28.773792	1
CCTCTTC	111545	28.48708	145