FastQCFastQC Report
Sat 18 Mar 2023
SRR6792045_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6792045_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82472965
Sequences flagged as poor quality0
Sequence length151
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCCTA2563200.0142.18751
ATCATTC3822600.0140.896471
TGCCTAA2537500.0140.153872
CAGATTC2228150.0139.832092
AACATCG2874600.0139.823852
GGCTAAC2368850.0139.671332
TCATTCC3778400.0139.279042
TAGCGAC1572500.0139.154132
ATAGCGA1618000.0138.133771
CAAGCTA1475250.0137.707172
ATCCGTC1609650.0136.795782
AGGCTAA2466250.0136.536741
AGTTAGC1213150.0136.460022
GCCATGC1662950.0135.898422
GCCTAAT1152350.0135.86293
GTGGTCA2675800.0135.77782
AGCCATG1717950.0135.670581
AGTCACT795550.0135.497741
GTCACTA780100.0135.491042
GCTAACT859450.0135.422763
Produced by FastQC (version 0.11.5)