SRR6792038_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6792038_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	78941170
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	9546106	12.09268370357318	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	1058155	1.3404349086794636	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	590961	0.74860937581746	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC	317943	0.4027594219847514	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG	236517	0.29961172351511894	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	229961	0.291306804801601	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA	174708	0.2213141761136806	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG	171500	0.2172503903856505	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA	124541	0.15776431993597256	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGAGCACACGTCTGAACTC	96917	0.12277117250732413	Illumina Multiplexing PCR Primer 2.01 (100% over 22bp)
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT	86602	0.10970447993106766	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTCAGGCAGCGAGA	80428	0.10188346587718423	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGTACC	54975	91.23097	145
GTATCAA	6820445	61.368366	9
AAGCAGT	6831015	61.344265	1
AGTGGTA	6857635	60.930103	5
GGTATCA	6910345	60.378487	8
GTGGTAT	6941785	60.157448	6
TGGTATC	6944460	59.995853	7
AGCAGTG	6974000	59.9134	2
CAGTGGT	7008625	59.61084	4
GCAGTGG	7138590	58.511963	3
CGTGGGG	47520	52.893757	145
TGCGGAT	18475	34.846207	145
GGTATAA	33995	34.71735	8
CAGGGGA	174800	33.07625	145
CGTGGGA	155900	30.287397	145
CAGGGGG	57810	30.223244	145
CCCTCTT	141120	30.161333	145
CGGTCTG	37885	29.470018	145
TGGTATA	40960	28.849272	7
TGACTGG	63040	28.196398	2