SRR6792035_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6792035_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	79386890
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	9020137	11.362250114597007	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA	923835	1.1637122955692054	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	491729	0.6194083179225185	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG	422424	0.5321080092695406	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC	286007	0.360269812811662	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA	257078	0.3238292871782734	No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	216880	0.2731937225403338	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA	169670	0.21372546524999278	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT	135382	0.17053445474435389	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG	121083	0.1525226646364406	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA	116441	0.1466753515599364	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGAGCACACGTCTGAACTC	84962	0.10702270866134193	Illumina Multiplexing PCR Primer 2.01 (100% over 22bp)
AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA	84395	0.10630848494001968	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGTACC	47470	92.8579	145
AAGCAGT	6083995	62.2083	1
GTATCAA	6163955	61.293697	9
AGTGGTA	6242265	60.453335	5
AGCAGTG	6265595	60.21281	2
GGTATCA	6331325	59.46774	8
GTGGTAT	6347560	59.41786	6
TGGTATC	6345235	59.324234	7
CGTGGGG	46940	59.278393	145
CAGTGGT	6372880	59.205284	4
GCAGTGG	6463535	58.349323	3
TGACTGG	62545	39.86931	2
AGTTCAG	62930	39.779385	9
GACTGGA	67245	37.255646	3
GTGACTG	69280	36.096283	1
GGTATAA	28460	35.43329	8
CCCTCTT	215690	32.876667	145
CAGGGGA	124195	32.74864	145
CCTCTTC	107770	31.234556	145
TGGTATA	33865	29.970652	7