FastQCFastQC Report
Sat 18 Mar 2023
SRR6792033_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6792033_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences126765521
Sequences flagged as poor quality0
Sequence length151
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATAGAC8118550.0142.582051
GGCTAAC4360400.0140.714572
ATAGACA8175550.0139.63812
AGGCTAA4458000.0138.171521
AGTTAGC2465350.0137.807042
TAGACAG2983200.0136.690843
TAGACAT2929600.0136.211523
TATCAGC1975950.0135.91581
GCTAACT1539900.0135.688453
TCTGTCA3100600.0135.581192
GCCACAT2805250.0135.144091
ATCCGTC2448250.0134.847232
GCCATGC2313900.0134.734222
CTAATCC2908650.0134.574252
ATCAGCA1959400.0134.050572
TAGCGAC1235800.0133.614412
CCTAATC2959700.0133.562211
AGTCACT1263000.0133.214721
GGCTTCA3143550.0133.070712
ACGTATC1057050.0132.834761
Produced by FastQC (version 0.11.5)