SRR3128150.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128150.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1587093
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18370	1.1574621020948364	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGTGTGAGA	6529	0.4113810595850401	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	4896	0.3084885384788415	No Hit
CTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTGC	4192	0.26413070941652445	Illumina Single End Adapter 1 (95% over 22bp)
CCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTG	3894	0.24535424200094136	Illumina Single End Adapter 1 (95% over 21bp)
GCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTG	3540	0.2230493109099467	Illumina Single End Adapter 1 (95% over 21bp)
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2221	0.1399413896980202	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATG	1955	0.12318118723981518	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6810	86.085365	1
ACGGGTA	170	80.16798	4
CGTAGGG	560	77.20611	2
CCGTACA	2810	76.76411	3
ATCCGTA	2910	76.31456	1
GGTAAGG	955	75.87099	1
TCCGTAC	2940	75.44779	2
CGTACAC	2835	75.25835	4
TAGGGCA	810	73.683556	4
TAGGGTA	675	73.10337	4
ATAGGGC	1005	72.47989	3
GTAGGGT	870	72.38314	3
AGTAGGG	2815	71.118576	2
GGATAGG	830	70.291374	1
TAAGGGA	1090	68.12122	3
GATTAGG	415	68.02391	1
GTAGGGC	845	67.8508	3
AGGGTAC	765	67.57455	5
TAGAGGG	2720	67.55534	2
AGGGCGA	780	66.87753	5