SRR3127390.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127390.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1737563
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20936	1.2049059516115388	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	6058	0.3486492288337171	No Hit
GCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTG	3145	0.1810006313440146	No Hit
CCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTG	2542	0.1462968536968156	No Hit
CTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGC	2442	0.1405416666906466	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1885	0.10848527506628536	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6585	87.29997	1
ATAGCGG	295	79.9308	1
AGGGATG	4155	79.62335	5
ACGGGTA	250	79.18853	4
GGATGGC	3255	76.0849	7
AGTAAGG	1160	74.39765	1
CTACGAC	985	72.995155	5
TAAGGGA	1835	72.437935	3
CGAGGGA	1035	72.41187	3
AGGGTAT	1110	72.39556	5
ACGACCA	990	71.677124	7
AGGGAAT	2590	71.48835	5
TAGGGCA	1070	71.36484	4
AAGGGAT	3825	71.35101	4
AGGGCAT	1685	71.11793	5
GGGTATC	630	70.86338	6
ATAGGGA	2000	70.70405	3
TACGGGT	180	70.70405	3
CGACCAA	1025	70.14656	8
GGGCGAT	510	70.0297	6