SRR3127147.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127147.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1204288
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13652	1.1336158792581177	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	7851	0.6519204708508264	No Hit
GCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG	4359	0.3619566083860339	No Hit
CCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTG	3593	0.29835056066323	No Hit
CTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC	3275	0.27194491683052563	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTT	2315	0.19222976563745547	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1838	0.1526212998883988	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCCTC	1759	0.14606140723813574	No Hit
GGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT	1461	0.12131649572195355	No Hit
CGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT	1427	0.11849325078386566	No Hit
AGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT	1426	0.11841021416803953	No Hit
AAAGCGGCTGTGCAGACACTGTCTCTTATACACATCTGACGCCTCCAGGT	1347	0.11185032151777648	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGGGT	85	88.464455	3
GGGCGAT	435	87.51117	6
CGTTTTT	4460	86.51072	1
ATAGCGG	215	85.35267	1
ACGGGTC	95	84.099434	4
CGCTACG	1400	82.24429	3
AGGGATG	3135	81.251144	5
TAGCGGG	535	80.85711	2
GCTACGA	1420	80.75496	4
TCCGCTA	1465	79.97472	1
CGAAGGG	1020	79.74989	2
TAACGGG	260	79.57259	2
AGGGAAT	2495	79.30111	5
AGGGCGC	220	79.03998	5
GGATGGC	2500	78.76654	7
GAGGGCG	300	78.3279	4
GATGACC	1535	78.07276	8
CTACGAC	1475	77.74376	5
AGGGCGA	515	77.56744	5
AGGGCGT	140	77.20893	5