SRR3127045.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127045.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	548723
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7716	1.4061739712022276	No Hit
GCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	2129	0.38799175540299935	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2056	0.37468813955310787	No Hit
CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	1839	0.3351417746294578	No Hit
CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	1755	0.31983350433643204	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT	869	0.15836770100761222	No Hit
GGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	801	0.1459752917227818	No Hit
AGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	669	0.12191943840516983	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	669	0.12191943840516983	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	625	0.11390082063263249	No Hit
ACTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	579	0.10551772023407073	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGCGTA	20	1.8376119E-5	93.99408	6
GTCGATG	15	6.9020037E-4	93.99407	7
TACCGAT	15	6.9020037E-4	93.99407	9
GCTACGA	365	0.0	86.26853	4
CTACGAC	370	0.0	85.102745	5
CGTTTTT	2125	0.0	85.02714	1
GGGCGAT	200	0.0	84.594666	6
CGCTACG	375	0.0	83.96804	3
CGAGGGA	355	0.0	83.4032	3
TCCGCTA	400	0.0	82.34236	1
GTACGGG	80	0.0	82.25981	2
TACGACC	390	0.0	80.7385	6
TAGGGCA	310	0.0	80.34977	4
AGGGATG	1055	0.0	80.184525	5
CTATAGG	65	0.0	79.62778	1
TAGCGGG	225	0.0	79.387245	2
AAGGGCG	230	0.0	77.64728	4
GGCGATG	85	0.0	77.40689	7
AGGGCGT	85	0.0	77.40689	5
ATGGCAC	675	0.0	76.58777	9