SRR3126950.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126950.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1242981
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13195	1.061560876634478	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	9921	0.7981618383547294	No Hit
GCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG	4297	0.34570118127308463	No Hit
CTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC	3686	0.29654516038459156	No Hit
CCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG	3219	0.2589741918822573	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTT	2388	0.19211878540379942	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCCGC	2189	0.17610888662014948	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1917	0.15422600989073848	No Hit
AGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCT	1398	0.11247155024895795	No Hit
TAGACCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCT	1243	0.10000152858330096	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4085	0.0	86.80672	1
CGCTACG	1745	0.0	84.547585	3
ACGGGTA	190	0.0	84.34855	4
TCCGCTA	1775	0.0	83.41782	1
GCTACGA	1765	0.0	83.32248	4
ACGGGAT	570	0.0	82.69466	4
TACGCGG	40	1.0095391E-9	82.52122	1
AGGGATG	4315	0.0	82.33435	5
GGATGGC	3185	0.0	81.29844	7
CGGGATG	850	0.0	80.71867	5
TAGGGCG	200	0.0	80.13113	4
AGGGAAT	2495	0.0	80.04946	5
CACGGGC	130	0.0	79.76854	3
GAATGCC	1800	0.0	79.62829	8
ACGACCA	1780	0.0	79.20294	7
CGAAGGG	1025	0.0	79.099625	2
TACGACC	1845	0.0	78.70497	6
AGGGTAT	795	0.0	78.61847	5
CTACGAC	1860	0.0	78.57556	5
CGGGTAT	150	0.0	78.322914	5