SRR3126897.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126897.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1651104
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11720	0.7098280907804717	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4025	0.2437762854429521	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2487	0.1506264899122042	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2172	0.13154834583406014	No Hit
CCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG	2034	0.12319030176173033	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1964	0.11895071418880941	No Hit
CTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC	1874	0.11349981588076827	No Hit
GCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG	1823	0.1104109735062116	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1778	0.10768552435219102	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4940	84.87794	1
ACGGGAT	455	83.66146	4
ATAGCGG	395	76.247734	1
CGAAGGG	1715	74.31436	2
TAGCGGG	870	74.05747	2
ATAGGGC	885	73.280365	3
AGGGATG	2305	73.19398	5
TAGGGCG	310	72.76647	4
AGAGGGC	1960	72.17092	3
AGTAAGG	1235	72.01764	1
AGGGTAC	635	71.04759	5
CGTAGGG	490	71.02369	2
GGGCGAT	750	70.80583	6
CGAGGGA	750	70.80583	3
GGTAAGG	965	70.71064	1
ATAGAGG	1020	70.58872	1
AAGGGTA	940	70.49253	4
TAAGAGG	1290	70.40632	1
AGTAGGG	2695	70.15116	2
TATAGGG	1450	70.05729	2