SRR3126889.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126889.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1857344
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10579	0.569576771992695	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	4957	0.26688647875676236	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2819	0.15177586919816685	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2763	0.14876081113676304	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2524	0.13589297405327178	No Hit
GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG	2327	0.12528643051583335	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	2011	0.10827288859791187	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1939	0.10439638537610696	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4370	82.55708	1
ATAGCGG	400	78.993095	1
TAGCGGG	840	76.86182	2
AGGGCAT	1835	75.80462	5
AGGGCGA	1090	75.01753	5
TACGGGT	170	74.846664	3
TAGGGCA	1130	74.65041	4
TACGACC	595	73.4524	6
CGAAGGG	1670	73.37131	2
AATCGGG	225	73.30859	2
GGGCGAT	990	73.10138	6
ATAGGGC	1300	72.13854	3
GTAGGGC	745	72.111786	3
ACGGGAT	415	71.54019	4
CGTAGGG	455	71.46725	2
AAGGGTA	1230	71.26322	4
AGTAAGG	1105	70.84678	1
AGGGTAT	1135	70.80114	5
AGGGATG	2215	70.649734	5
AGGGCAC	1505	69.94417	5