SRR3126658.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126658.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1321643
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6633	0.5018753173133743	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA	5075	0.3839917436100369	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5025	0.38020857372225325	No Hit
CCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG	3441	0.2603577516772684	No Hit
GCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG	3400	0.2572555523692858	No Hit
CTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC	3365	0.25460733344783726	No Hit
GGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGCATTGGTAT	3061	0.2316056605301129	No Hit
GGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAATGGACGGG	2427	0.18363506635301666	No Hit
GGGAATTCATCTCCTCTAACTTTGGAGAGGTAGGAATGGGAGTATTTGCA	1391	0.10524778627814017	No Hit
GCAGAGAATATCAACTGTCTCTTATACACATCTGACGCGTCTGTATTCGT	1337	0.10116196279933386	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGGGCG	195	91.91538	4
AATGCGG	255	86.975075	1
AGGGATG	2540	86.95412	5
GTACGGG	270	85.599556	2
ACGGGTC	145	84.5755	4
CGCTACG	965	84.06986	3
AGTAAGG	715	83.15754	1
GCTACGA	980	82.78307	4
CGAGGGA	605	82.639885	3
TCCGCTA	990	82.4609	1
AAGGGTC	460	82.02974	4
GGGTACG	150	81.45319	6
AGGGATT	1335	81.31239	5
AGGGCGA	505	80.9569	5
ATTGCGG	175	80.89475	1
AGTACGG	140	80.89475	1
TAACGGG	375	80.49853	2
GGATGGC	1670	80.19631	7
AGGGCAT	1255	80.13017	5
CTACGAC	1015	80.095116	5