SRR3126638.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126638.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9397054
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	322548	3.432437442628296	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	44345	0.47190321562481174	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	21178	0.2253685037885278	No Hit
CGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCT	19933	0.21211967069679497	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTT	19739	0.21005519389374586	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCT	19138	0.20365957245749572	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCC	15162	0.16134843962799406	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	14910	0.15866674811063128	No Hit
GAATCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTT	12919	0.1374792567968642	No Hit
CCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTG	11550	0.12291086121246084	No Hit
CGTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC	10424	0.11092838244837158	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTC	9702	0.1032451234184671	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	93045	90.264435	1
AGGGACT	23490	69.90522	5
ATAGGGC	4750	69.75338	3
TAGGGCA	4035	69.185104	4
GGTAAGG	5370	68.51788	1
AGTAGGG	13490	68.48873	2
GTTTTTT	124745	68.00708	2
GACTTAA	19890	66.82121	8
GTAGGGA	6285	66.70053	3
ATAGGGA	5740	66.07412	3
GGACTTA	20540	65.34728	7
GGATAGG	4970	64.66001	1
ATAGAGG	5760	64.36877	1
AGTAAGG	5200	64.243095	1
GTAGGGT	2935	64.210495	3
AATAGGG	11125	64.19871	2
AGAGGGC	13690	63.887024	3
GTAGGGC	4425	63.830894	3
AGATAGG	4605	63.654613	1
AAGGGGC	28790	63.353657	4