SRR3126634.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126634.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11002079
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	349462	3.176326946934302	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	58932	0.5356442177882925	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	29171	0.2651407974801854	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT	23302	0.21179633412921323	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	20199	0.1835925737308376	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCC	18298	0.1663140211954486	No Hit
CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	17395	0.15810648151135798	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT	17138	0.15577055936428016	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCT	15952	0.1449907785610338	No Hit
CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	12231	0.11116989798019083	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT	12024	0.10928843539480129	No Hit
GAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGGGGA	11026	0.10021742254350291	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	104600	90.139084	1
AGGGACT	31010	72.21547	5
ATAGGGC	5730	72.0947	3
AGTAGGG	16225	69.116234	2
GACTTAA	26895	68.86586	8
TAGGGAC	5010	68.75991	4
GTAGGGA	7465	67.80395	3
GGACTTA	27655	67.63609	7
GTTTTTT	141515	67.37836	2
TAGGGCA	4530	67.22733	4
GGTAAGG	6320	67.080795	1
AGATAGG	5515	66.1221	1
ATAGGGA	6420	65.66387	3
ATAGAGG	7145	65.19637	1
CAGGGAC	28630	64.92235	4
ACTTAAT	28505	64.61351	9
AAGGGGC	34895	64.56601	4
GATAGGG	15050	63.796318	2
AATAGGG	13670	63.598194	2
TATAGGG	7310	63.550056	2