FastQCFastQC Report
Sat 31 Dec 2022
SRR1954467.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954467.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences417602
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT35710.8551204256684595No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCG31580.7562224318849048No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGC27530.659240137738804No Hit
GAATCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTC19720.4722199606323725No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC9850.2358705178615045No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACAGTTCGTCGTA4890.11709714033936618No Hit
GCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCTGC4730.1132657410644585No Hit
GAATGACTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCT4640.11111057897232293No Hit
GAATGATCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTC4640.11111057897232293No Hit
GAACTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCT4190.10033476851164506No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)