FastQCFastQC Report
Sat 31 Dec 2022
SRR1954380.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954380.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences974631
Sequences flagged as poor quality0
Sequence length51
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT441544.530329940254312No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCG81100.832109793347431No Hit
GAATCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTC58940.6047416919839406No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGC41850.42939327807139316No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC30720.3151962127205065No Hit
GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC17920.18386445742029547No Hit
GAATGACTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCT16590.17021826722113292No Hit
GAACTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT16340.16765319387542568No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTC14800.15185234206586903No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)