SRR6503018_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6503018_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	55909317
Sequences flagged as poor quality	0
Sequence length	150
%GC	34

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	1030962	1.843989616256625	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	348870	0.6239925985860282	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT	151120	0.2702948419133791	No Hit
AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	87348	0.1562315633367512	No Hit
GCCTAAGTGACTGGAGTTCAGACGTGTGCTCTTCCCATGTACTCTGCGTT	82768	0.14803972654504077	TruSeq Adapter, Index 3 (97% over 38bp)
GCCTAAGTGACTGGAGTTCAGACGTGTGCTCTGCGTTGATACCACTGCTT	67291	0.12035739946528053	TruSeq Adapter, Index 3 (97% over 34bp)
CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT	58696	0.10498429090092444	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AACGTGA	288930	142.56815	1
AAGTGAC	319055	142.22722	5
ACGTGAT	291460	142.10983	2
CAATGGA	399510	141.29485	1
CAAGCTA	130525	141.27893	2
AGTGACT	241055	141.21716	6
ACAAGCT	130550	140.94075	1
CTAAGTG	344945	140.79906	3
TGACTGG	255715	140.39499	8
ACTTCGA	73325	140.13075	2
TAAGTGA	305495	140.10214	4
CGAACTT	75865	140.05344	1
CTCAATG	153430	139.92607	1
GTGACTG	237735	139.856	7
CAAGACT	106910	139.73549	1
GAACTTA	76235	139.48543	2
CCTAAGT	385775	139.47403	2
AACCGAG	107495	139.34406	1
AACATCG	96860	139.3337	2
CGTGAGA	200405	139.29924	2