SRR6503003_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6503003_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	105293537
Sequences flagged as poor quality	0
Sequence length	150
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	1769495	1.680535245007488	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT	712071	0.6762722768065053	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	645981	0.6135048915680361	No Hit
CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT	382518	0.36328725475334733	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTACCATGTACT	243652	0.23140261685767094	No Hit
AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	231351	0.2197200384673183	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC	191524	0.18189530474220844	No Hit
CATGTACTCTGCGTTGATACGACTGCTTCCCATGTACTCTGCGTTGATAC	187834	0.17839081614287494	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCGCATGTACTCTGCGTTGATAC	147043	0.13965054664276308	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	128019	0.12158296097508814	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCAATG	265365	142.39125	1
CAAGACT	180335	140.32954	1
TGCCTAA	137175	140.32681	2
ATCGTGA	562475	139.78067	4
ATGCCTA	138880	139.63742	1
CAAGCTA	97155	139.10759	2
AAGACTA	181845	138.89323	2
TCGTGAC	492210	138.26608	5
CGAACTT	70450	138.13214	1
TCAATGA	272800	138.08083	2
CCGAAGT	166590	138.038	1
TGATCGT	860650	137.75642	2
ACAAGCT	98390	137.67345	1
GATCGTG	771270	137.3417	3
CAATGGA	261955	137.24127	1
AGTACAA	138200	136.91737	1
GAGTCAA	100880	136.90971	2
ACGCTTA	114615	136.77104	2
AGAGTCA	101755	136.76671	1
CGAAGTA	168560	136.75002	2