SRR6502994_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6502994_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	101177121
Sequences flagged as poor quality	0
Sequence length	150
%GC	33

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	2706184	2.6746995499110913	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	901427	0.8909395633030516	No Hit
AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	737682	0.7290996153171823	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	532238	0.5260458043671751	No Hit
ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC	199225	0.1969071644171413	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA	144278	0.14259943213841794	Illumina Single End PCR Primer 1 (100% over 21bp)
GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC	140744	0.13910654761564129	No Hit
CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	135657	0.134078731099692	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC	102231	0.10104161789699473	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATAGAC	212520	143.38208	1
ATAGCGA	158180	142.89607	1
AGTTAGC	482760	142.42792	2
GAGTTAG	484490	142.08835	1
TAGCGAC	159380	141.48317	2
AGAGATC	357925	141.40964	2
GTACGCA	116505	141.22144	1
ATGAATC	222285	140.80429	2
AGCACCT	291890	140.67188	1
ATAGACA	217005	140.5258	2
GGCTAAC	281145	140.1312	2
GTTAGCT	206155	139.63509	3
TGGAACA	313780	139.38866	1
GCTAACT	147030	138.77542	3
TACGCAA	118240	138.76149	2
TATCAGC	166000	138.73756	1
GAGATCT	214835	138.6901	3
GTTAGCG	144025	138.66267	3
AGCGACT	77840	138.57695	3
AGGCTAA	284285	138.44551	1