SRR6502976_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6502976_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	113955208
Sequences flagged as poor quality	0
Sequence length	150
%GC	34

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	5430627	4.765580349780942	No Hit
GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC	869319	0.7628602634817708	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	784555	0.6884766512821424	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	646302	0.5671544208843882	No Hit
CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	559046	0.4905839845424177	No Hit
AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	363125	0.3186559055730037	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC	320420	0.2811806547709518	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA	215820	0.18939020321037017	Illumina Single End PCR Primer 1 (100% over 21bp)
GACAGTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACT	184963	0.1623120199999986	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATA	157213	0.13796034666533188	No Hit
GTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACT	140519	0.12331073100230751	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAGCGA	183655	142.3155	1
ATCATTC	448935	141.31996	1
TATCAGC	248490	140.85452	1
TAGCGAC	186375	140.066	2
ACAGTGC	429310	140.04912	2
ATGAATC	205615	139.87003	2
GACAGTG	429375	139.83871	1
AGAGATC	354175	139.06909	2
TCACGCA	192860	138.84569	2
GTCTGTC	308360	138.81087	1
GATAGAC	113360	138.68323	1
GTGTGAC	446435	138.53761	5
ATCAGCA	252430	138.25711	2
TCAAGTG	559625	138.1416	1
ATCCGTC	198240	137.82384	2
AGTTAGC	121135	137.81767	2
GTGACTG	298690	137.75365	7
CAGATTC	267220	137.47488	2
CCTAATC	176680	136.98662	1
AGTGTGA	488310	136.84439	4