SRR6502973_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6502973_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	115615751
Sequences flagged as poor quality	0
Sequence length	150
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	2131541	1.843642394365453	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	457183	0.3954331447451308	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT	412681	0.3569418495581973	No Hit
AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	330854	0.2861668908763132	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC	227506	0.1967776864590016	No Hit
CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT	184868	0.1598986283451984	No Hit
CAACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA	168842	0.1460371952261072	No Hit
CATGTACTCTGCGTTGATACGACTGCTTCCCATGTACTCTGCGTTGATAC	148534	0.12847211449588733	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCAATG	363640	140.00229	1
ATGCCTA	190155	139.70752	1
CGAACTT	226570	139.68727	1
ACAAGCT	233510	138.39684	1
AGTCACT	173155	138.23883	1
GTGTGAC	880290	138.15968	5
ACGCTTA	270495	137.70932	2
CAAGCTA	233970	137.68387	2
GTGACTG	591695	137.63641	7
TGTGACT	643375	137.22147	6
CACTGTG	948915	137.03577	1
TGACTGG	601350	136.88033	8
ACGTATC	185100	136.7693	1
CAAGACT	181935	136.71494	1
ACTGTGT	1008400	136.45828	2
ACTTCGA	156735	136.44572	2
GAACTTA	230595	136.4061	2
CCGAAGT	152800	136.21053	1
TGCCTAA	194800	136.12495	2
TGTGTGA	829335	135.78227	4