SRR7403963_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR7403963_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	168185584
Sequences flagged as poor quality	0
Sequence length	150
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	6722537	3.9970946618112047	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	3771107	2.242229631286353	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	1809145	1.0756837518250078	No Hit
AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA	1018213	0.6054103899891919	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT	625923	0.3721620992201091	No Hit
CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	613168	0.36457821497947174	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC	274735	0.1633522882674653	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC	219811	0.1306955059834379	No Hit
ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC	188014	0.1117896049877854	No Hit
CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA	174005	0.10346011582062825	Illumina Single End PCR Primer 1 (100% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACTTCGA	135990	135.49013	2
ATAGCGA	124955	135.21858	1
GCGAGTA	185330	135.07538	1
ACGCTTA	142830	134.74847	2
GATGTAC	239260	134.55453	2
CGAACTT	177375	133.72147	1
AACATCG	260255	133.7039	2
CGTGAGA	191130	133.23357	2
ATGAATC	138775	132.96822	2
CGAGTAA	187795	132.6474	2
ATGCCTA	163705	132.5666	1
CTAACGA	249030	132.29417	2
GGCTAAC	167160	132.24051	2
TAGCGAC	127835	131.98434	2
GATAGAC	101425	131.8503	1
GAACTTA	180500	131.73767	2
TATCAGC	130560	131.48267	1
TAAGGTC	142080	131.37013	2
TAACGAT	135800	131.29996	3
AGTTAGC	96025	131.17441	2