SRR6211792_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6211792_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	75812351
Sequences flagged as poor quality	0
Sequence length	150
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC	1699078	2.241162525087766	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	393878	0.5195433129359093	No Hit
AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	159216	0.21001327343086879	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC	122618	0.1617388174652439	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATAC	93980	0.12396396993413382	No Hit
ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT	87415	0.11530443106823056	No Hit
CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG	78235	0.10319558616510915	Illumina Single End PCR Primer 1 (100% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGAAGT	293855	141.00282	1
AGAGTCA	220295	140.78735	1
CGAAGTA	294700	140.61768	2
GAGTCAA	219075	140.52017	2
ACTTCGA	204335	140.39925	2
ATGCCTA	156395	139.9529	1
CAATGGA	379215	139.4507	1
AGCTGAA	179770	139.18172	2
ACGTGAT	128550	139.05264	2
GAGCTGA	179820	138.74792	1
AGCAGGA	257155	138.72827	1
AACGTGA	128595	138.56378	1
AGTCAAT	126835	138.39531	3
TGCCTAA	158215	138.18796	2
CTCAATG	214555	138.17912	1
AGTCACT	156235	138.0448	1
GCAGGAA	258165	137.84312	2
GTCACTA	156555	137.59279	2
AACATCG	144050	137.13622	2
ACGTATC	99640	136.8764	1