FastQCFastQC Report
Sun 19 Mar 2023
SRR6155061_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6155061_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108212639
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCGAC2609750.0139.658942
ATAGCGA2940350.0139.359221
TATCAGC2806800.0139.069671
GTCTGTC4893550.0138.197171
CTAACGA2519350.0137.088792
TCTGTCA4053150.0136.744662
AGTTAGC2389600.0136.611632
ATCAGCA2369850.0135.903052
GCTAACG3239350.0135.626071
GTCGTAG2007450.0135.489641
ATCATTC3973150.0135.420261
TCACGCA2297700.0135.25432
GGCTTCA4165950.0134.979372
TGGCTTC5076200.0134.614531
CCGTCTA2583100.0133.906162
GGTGCGA2813100.0133.3941
AGCACCT2685200.0133.36121
CTGTCAG1349550.0133.341933
GTGCGAA2246100.0133.015032
ATGAATC2184050.0132.917482