FastQCFastQC Report
Sun 19 Mar 2023
SRR6155051_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6155051_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121095093
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG1401785611.575907539044543No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTCGGGGACGGGTGGCGTGTG22964891.8964343996994162No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA18767481.5498134181209144No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA7637980.6307423208304568No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA7255790.5991811740877064No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA6065390.5008782643240548No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4002210.3305014184183334No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGAAAAAAAAAAAAAAAAAA3872830.3198172530409634No Hit
AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA3806280.3143215720557727No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAACCCATCGGCTGGCACCAC3337230.27558755002566454No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGACATGTCGCATATAGGACT2915800.24078597470501964No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGTAAGTTAGAAAAAAAA2595770.21435798393581482No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGTATCAACGCAGAGTACATG2346440.19376838002841287No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG2298190.189783908089488No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGTATCAACGCAGAGTACATGG2116470.17477751968033917No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGAAAAAAAAAAAAAAAAA1652840.1364910797830594No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGCGGCGTCGCCAGGAGGAGC1597220.131897995239163No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGCCATCTCATCCCCGCCTTGT1526140.12602822808022454No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGAAAAAAAAAAAAAAAAA1474260.1217439917239256No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGGAAAAAAAAAAAAAAAA1434600.1184688796597233No Hit
AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA1421880.11741846550297459No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC1308470.10805309840259175No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGAGAAAAAAAAAAAAAAAAAAA1233170.1018348447859898No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGCAGT125674450.080.893721
AGCAGTG129696650.078.464542
AGTGGTA129902250.078.3113255
GTATCAA130861950.077.767989
CAGTGGT131626000.077.286154
GCAGTGG132060050.077.028363
GGTATCA132126000.077.022018
TGGTATC132693400.076.680417
GTGGTAT132708350.076.643456
CATGGGG21949800.023.59758225-29
ATGGGGC3754750.022.94584725-29
ATGGGAT9522800.022.90404725-29
ATGGGGT4997700.022.53465725-29
ATGGGGA8467500.021.74989725-29
ATGGGAG9648250.021.62418425-29
CGCATAT551200.021.53178435-39
ATGGGGG6945200.021.52455525-29
ATGGGAC5546900.021.01921825-29
ATGTCGC541600.020.97745530-34
CATGTCG550150.020.9576830-34