FastQCFastQC Report
Sat 31 Dec 2022
SRR5847682.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847682.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115951
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGGTGAATCTCGTATGC11040.9521263292252762No Hit
CTTATACACATCTCCGAGCCCACGAGACTCGGGTGAATCTCGTATGCCGTCT10580.9124543988408897No Hit
CGAAATGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1630.14057662288380438No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGGTGA1590.1371268898069012No Hit
GCGAGGGGAATGAAACATTTTGCATAATGAGTGGCTGGATTCAATGGTTTTT1510.13022742365309484No Hit
TGTTCAGGGGGCAGGCCTTTAATCAGTCTTTGTTCAGTAGTGAGGGCAGAAT1470.12677769057619165No Hit
AAGACTGGGGTTTCTTCAACACGTCTGGTAAACCCACCACCTAGATCTTCAG1410.1216030909608369No Hit
ACGACAGGGGAAGCAGCACATTAGTAACCTGACAAGATTTCTTTTTCCCTTT1400.1207406576916111No Hit
TTCACGGGGGACTATTCCTAGCCATGCACTACTCACCAGACGCCTCAACCGC1390.11987822442238531No Hit
ACAGATGGGATGTTCAAGAGAAAGCTATGAAACTTCATAATGCTTCTAATTC1390.11987822442238531No Hit
TAACATGGGAACCGGAGGTCTGTGAAACTCCACACTAAGCTATCTTCCCTGG1370.11815335788393373No Hit
CAACCCCCTGACAAAACACATAGCCTACCCCTTCCTTGTACTATCCCTATGA1360.11729092461470794No Hit
CTCAGAAGGGGCCACAGGCTGGTGGCCATGTTCTCTGAATTGGGTGCAGAAG1350.11642849134548214No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGGTGAA1330.11470362480703056No Hit
GTCTGCGGGGAAATTCTATGAGGCATTCTCTAAAAATCTCAAGCTTGGAATC1320.11384119153780477No Hit
TCAGGAGGAATTCCCATTATCAAGTTCATCTAGTGGTCCACACAGGAGAGAA1320.11384119153780477No Hit
TAGTACGGGTCCTGTTCTAATTTTGCAGTGCAACACAGATATCTGTTTGAAG1320.11384119153780477No Hit
GCCCATGGGAAACCTAAACCAGATCCATGTTTTTCTTTGCAATTTAGTGCTC1320.11384119153780477No Hit
ACTTTTGGGATATCTTTTACATCTATTTTTCCCAGTCTGTGGCTTGCCTTTT1320.11384119153780477No Hit
CAAAGGGGCCGACAGTCAGCCACCTCAGCCCTGTGCATTTCTACTACAGGAC1310.11297875826857898No Hit
AAGGAGGGGCAGGGGAAGACCAAAGTTTGCAACTCGAACTGCTTTCGTCCAT1300.11211632499935319No Hit
TAGACTGGAAGAAAGTGGTTTGTAAATTATGTTCCATTTCATAAATAGACAC1300.11211632499935319No Hit
AACGCAGGGCATAATCAACTGCTAAATTATGATTTGTTTTCTTCCAGTTACT1290.11125389173012737No Hit
CACGACGGGTATAGGAAATCTGAATCAATGGGTTTGAATAAAAAAGAGCTTC1290.11125389173012737No Hit
GCGAAAGGGGACCCCGCACAAGAAAAGAAATAACAGAAATCAGAGCAGAACT1280.11039145846090158No Hit
CTGATAGGGAAATTATAAATTGTCATAAAGGAATCAGAACAATTCAAACAAA1280.11039145846090158No Hit
GACACTGGGATCTCATTGTAGTTTTAATTTGCATTTCTCTGATGACTAGTGA1280.11039145846090158No Hit
TACTGCGGGAACCCAAGTCTTGAGCAATGTTTTTCTCAAAAAGCTGCTATCC1270.10952902519167579No Hit
CTCAATGGGAGCCTGGGTGACAGAGTGAGACCCTATCTCAAAACATAAATTT1270.10952902519167579No Hit
GTAAATGGGGAGTGGACTTGGCGGCAGAGGCAGTGCGGATCCGGCGTTCTCC1260.10866659192245No Hit
AAAAGTGGGAACATTGATTCTCTGTTGTACTTTTTTGTAACTAATTCTGTGA1260.10866659192245No Hit
CAAAGCGGGAAGTGTTCTATAACATGAAGCATATTGCATAGAATAAAAAGAT1260.10866659192245No Hit
GTAGAGGGATGGTCTACTTAGGTTGACCCATGTGAAATTGCCAGTATTTAAA1260.10866659192245No Hit
CGTAATGGGGGAAGGAACTGGGCAGTCCCACCAGAGCAGAAAGAAAGGAGGC1250.10780415865322421No Hit
ATGTCAGGGAGCGGTTCCGCCTGGGCACCGACATGTCACTCTTCGCCACCGA1250.10780415865322421No Hit
TCAGAAGGGTTTGCTCAAGGGCAGAGTTTTGACTTCAAAGACCCTGAAGAGA1250.10780415865322421No Hit
AGACAGGGGATCCCTTTGTATTATAATAGTGACATTTCTAGAAAAGATGCCA1250.10780415865322421No Hit
AGACAGCGGGATAGCATATCAAACTGACTTTAGAAAAAAACAAACGAGAAAT1240.10694172538399842No Hit
TTACATGGGGTTTGACCAGGTGTTACTATTTATTTAGCTTCAGTATGCAAAG1230.10607929211477261No Hit
ACTGTTGGGAACCCAAGTGTTACTTGCTTATTTGATGCTCTCTTGTATTTTA1230.10607929211477261No Hit
CAAAAGGGGACTGCTCCGGGTGTCGGCTCCGGCGGGACGGGCGGTTCTGCGT1220.10521685884554682No Hit
GCAGAAGGGAGAGCATTCTAGAACGGACCTGTCCCGTGATTTAGCAGCATTG1220.10521685884554682No Hit
GTTTAAGGGACCCTGACCAGAAACTTACACTATAAAAAAGTTTAGTATAATT1220.10521685884554682No Hit
GCAAGCGGGGGTCAAATAGAAACAAACCACCACATAGTTAGTGTGAAGATTT1210.10435442557632103No Hit
GGTACAGGGGACTGAGCTCATCCATCATGATTTCTTCGTGATATTACTGCCA1210.10435442557632103No Hit
CTAGCAGTGGGAATTGTACCCATAAAAATGGTTAAAATGGTAAATTTTGTTA1210.10435442557632103No Hit
GATGAAGGGGAAGAAAACAGAAGGGAAACCCTTCAGGATATGGGTCTAGCGA1210.10435442557632103No Hit
TGTAATGGGGTCCGATCTGACTTGGGGAAGTTGGGAAATTCAACCCCAGAAA1200.10349199230709524No Hit
ACACAAGGGGTCCTAATTCAACTTTTTATTCCTGAGATAAATCCCATGATAT1190.10262955903786945No Hit
GTAAGGGGGTCTCACTTCCTGAAATCCCCTTACAGAAAGCATATAGAATAGC1190.10262955903786945No Hit
ACGGCTGGGATAAAGGAAAAGCAAAATCTGTATAACATTATTACTACTTGAA1190.10262955903786945No Hit
TATTGCGGGATTTCAGTGTCAAATCTCATAGTGTTTGATTGTCTCTCAGTAT1190.10262955903786945No Hit
CTAGGCTTGGGAGGGGAAGAGAGACCTGAGCCAGCAAGCTCAGCTGCCTTAC1190.10262955903786945No Hit
GCACCTGGGAGAGCTGTGTTGAAATCCATTTTGGTGGTTGGTTTTTAACCCA1180.10176712576864366No Hit
ATTCGTGGGCCAAGGTGGACTTGAAAACCTCGAACTTTCAAGAAAGTATTTT1180.10176712576864366No Hit
GTAGCAGGGGTAGCCTAAGAAAGAGACTTTTCTTCCTGTTTTTCTCTCTCCC1180.10176712576864366No Hit
TGCCATGGGAATACACGAATTTTTGGTAGAAATGAAAATCTTTCTGTTTTAT1170.10090469249941787No Hit
AGACCTGGGATTTGTTATTAGGAAAATAAATGGATCTCAGGATTCTCCCCAG1170.10090469249941787No Hit
TTCTGGGAACAATGTAGTTCTCTATTAATTTAGCAAATTTGTACATTCACAA1170.10090469249941787No Hit
TTCGGGGGGAGAAGACTTCACTGGGACTTACGTCAGTGAGCTTAACATCTTT1160.10004225923019205No Hit
AATCGCGGTAGAAAAAGCAGGAATGAATGGATTCGATAGACGTCCACTGGTG1160.10004225923019205No Hit
GACCTTGGGAGAGTGGTAGTTGTCATTATCATTGTCTCAGTTTGCCTGTAAC1160.10004225923019205No Hit
TATGCTGGGAGATTCAGTGCCATCCCCATCAAGCTACCAATGACTTTCTTCA1160.10004225923019205No Hit
GGTATAGGGAACTGTTTATTAAAAACACAGCACTCTGCAAAGACGAAAGTCG1160.10004225923019205No Hit
ATATTTGGGGCTACCATACAATCCAGCAATGCCACTACTGGCTGTTTATCTA1160.10004225923019205No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)