FastQCFastQC Report
Sat 31 Dec 2022
SRR5847571.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847571.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76033
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGAACGGAAATCTCGTATGCCGTCT7460.9811529204424395No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAACGGAAATCTCGTATGC5890.7746636328962424No Hit
GGTCAGGGGCATAGGATGCAAGAAAAGGAGTGAGGAATGGGAAAATTGGAAG1420.18676101166598713No Hit
GGAAACGGGCGCTGGACGAGTTCCCGCTGACGCGCCTGGGCCAGCTCAAGGC1230.16177186221772125No Hit
CGTACTGGGATATAAGGAGAAAGAGACAGAGAGAATGTGTGTGTGAGAGAGA1220.16045664382570726No Hit
AATGCAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1200.15782620704167927No Hit
CAACGAGGGGGACGGGTGTTCGCCAATGCCCCAGACTCGGCCTGCGTGATCG1170.1538805518656373No Hit
GCGTTTGGGGGGCTTCTCTCATTCATTAAAAGAAAACGCGACATCTTTCTAA1160.1525653334736233No Hit
AGGCCAGGGATGGAAACCAGAATCACTTTGATCCAAGTGACAAAGCTTACTG1160.1525653334736233No Hit
ACACTAGGGCTAGATGTCGATGACTGCAAGTAATAATACAGTTTATAATGAA1160.1525653334736233No Hit
TCGCTAGGGGTAGTAAACATCTTATATTGTATCTCAAAACTGTTTCCATGCT1140.1499348966895953No Hit
GGAGAGGGGAGAGCAGGAAAGAATAAAGCTAAGATAGTTTATCATGAGAAAA1130.1486196782975813No Hit
ACTAAAGGGGTTCAAAGTAATTAACTGGCTTTGCCAGTGGTGAGTCCCACAC1130.1486196782975813No Hit
CAAAATGGGAGATGAAACACTAATGAATGTTGAATTCTCATGCTTTTAGGTG1100.14467402312153935No Hit
ATGTTAGGGACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCT1100.14467402312153935No Hit
TCTGCAGGGTGTCCAGGCAGATTTCAGTGTCCTCAGTGCACTGTGTCCTTGT1100.14467402312153935No Hit
AAACGTCGGGAGGCAATAATAAATAGTACCATCACCCCAAACATGACATTTA1070.14072836794549734No Hit
GCGTATGGGTAAAGACTTACATGTTAGACCTAAAACCATAAAAACCCTACAA1060.13941314955348336No Hit
TTACAGGGAGGCCTGGGAGAAACAAAATTAATTTAATTTTGAATGGTCCTTT1050.13809793116146934No Hit
TTTGCTGGGAGCTGTGGCAAGGAGAAATCCTTCCGCCTCTGGGCCTCAGGCT1050.13809793116146934No Hit
ATATCCGGGAGGAGATTCACAGTCTGCAGCTGAAAGCATGCTTTGTTCATAC1050.13809793116146934No Hit
CAAAATGGGATAGCTTTTCTTCTGATAACCATGACTTCAGGAGCTTTAAAAC1050.13809793116146934No Hit
CTTATACACATCTCCGAGCCCACGAGACGAACGGAAATCCTGTCTCTTATAC1040.1367827127694554No Hit
GCGATAGGGATGACCAAACTCCTGTCATGTGGATGCACGTGAGTGGGTAGCA1040.1367827127694554No Hit
TCATATGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG1010.13283705759341338No Hit
GATCTCGGGGAGGTGTTGGCATTCTTCGCTGATTTGGCTGTTCCCAATGTTT1010.13283705759341338No Hit
GACCTTCCACCTTAGAAAAATACAGAACAGTTTAAGCAAACAGAAGAACCTT1010.13283705759341338No Hit
TGTTATGGGATACTTGGTAAGACTTCAATGTTTTCTAATAATTATATTTCAA1000.1315218392013994No Hit
CTTGTAGGGATATGCATCTGGTGGTTACATAATGTTGCCATCCTGGTAGCAT1000.1315218392013994No Hit
TCTTCAGGGGGCAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGT990.1302066208093854No Hit
ATGACAGGGGGAAATGCAAAATACATACAAATTATTATGAGGTTCTTTTAAG990.1302066208093854No Hit
CGAATCGGGAAGGTGGAAAGTTTCCCAAACAAAGTGTCTTCCAAAAGACCTG990.1302066208093854No Hit
GGGCAGGGCACTTGAGGGAAGGTGAATTTGAAAAGGCACACACTGATTTTTT980.1288914024173714No Hit
TGCCAAGGGTGTGGACAGGGGCAAGCAGTCCTTGGAGACCATCTGCCTGCTG970.1275761840253574No Hit
CTCTGCGGGATAAATGGATTAAAGATAACATCTCTCCCAAACTTCATGTAGA970.1275761840253574No Hit
AACGTGAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG960.12626096563334344No Hit
TGCTAAGGGGAGAGGTACATGTTTGGAGGAAGGGAACAGCTGTTGCTGTGGA960.12626096563334344No Hit
ATTCGCGGGTGTACGTGTGTGTGCGCATGTGTGCGTGTACATGTGTTTGTGT960.12626096563334344No Hit
CAATGCGGGTCCTTCAAGAATTAAGGCAAAATCAAGATCAAAATCTATCATT960.12626096563334344No Hit
ACGATAGGGATGAGTGCGTGGCTTTCCAGATGGAACAAACCACAAATGAATG960.12626096563334344No Hit
CCAAAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC950.12494574724132942No Hit
TCTTCTGGGAGGTGGCTGAGTCACAAAGAAGATTTAATCTCTGATTGCTGCA950.12494574724132942No Hit
ATTGTAGGGCACACACTTTCAGCAAATGATAGACAAGTACATTAATGAAGCA950.12494574724132942No Hit
TTAGCCGGGTGGCTAACACCTATCTAGGCTTTAATTTCCTCATCTATAAAAT940.12363052884931543No Hit
TGAATCGGGATGAACAGCTTTCTGTAGCAGAGATCACCAATGCTTGCTTTGA940.12363052884931543No Hit
AGCAATGGGGGTTTCTTGCTTGCTTGGTCCTGGAACTCCCCTTGGCTGCCCC930.12231531045730143No Hit
GTTGCAGGGAGCAGAGGAAAACAGCATGTGGGTATTTGTCGACCAAAATGAT930.12231531045730143No Hit
ACAAAAGGGAGTTCTGTTGACTACAAAGCCCATAGCCTTTTTATCAGTCCAT930.12231531045730143No Hit
CTATACCGGGCTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAA930.12231531045730143No Hit
TTACGAAGGGGGGAAAGTAAATATACAAGGTCAAAAAAACAATAAACACAAA930.12231531045730143No Hit
TAAGCTGGGCGGGCAGATTGGAATGATCCAGGCTCTCGGTGGCTTCTTCTCT930.12231531045730143No Hit
CATATTGGGCTGGTTCAAGCCGTTCTCCTGCCTCAGCCTCCCGAGTAGCTGG930.12231531045730143No Hit
GTTACCGGACCTAATGATTATTTCTATAACATTAAGCATGGTAATAAGTAGC920.12100009206528745No Hit
CTCGCTGGGATGGAGGTGTTCAGCTACCACCAAGGCCTGAAGAAGTGGGTGG920.12100009206528745No Hit
GGTGATTGGGGAACTTAAGGAGGCTAGTCAAAGAAACTTGGAGTTATAGGTA920.12100009206528745No Hit
GCAAACGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA910.11968487367327345No Hit
TTTCGCTGGGGAAGATTCAGCATGGAATCATTGGAATTTTATGTACAGGATT900.11836965528125945No Hit
CGCTCAGAAGTGAACCTTTGGGGCACAGTGCGGATGACGAAATCCTTTCTCC900.11836965528125945No Hit
GACCTTGGGTGAACAGAAACAAACCAAATTACTGCTGTTATCCAGGTCTTTT900.11836965528125945No Hit
AGTGGCGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC900.11836965528125945No Hit
TATACTGGTCTTTGCTTTTAGTAATAAAACATCAAATTAGGTTTGGAGGGAA900.11836965528125945No Hit
ATGCTAGGGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTGA890.11705443688924545No Hit
GCAGTTGGGAACGGTTGCAGCTGTGCTACCAGCTCACCACAGTTGGCAAATT890.11705443688924545No Hit
CAAGCAGGGAATGTGGGCATAACTCTTTGGACCTGATCTTGATGCTTCTGCT890.11705443688924545No Hit
TGGTTAGGGTAGCAAGACCCAGAATCAGGGCTATGGTGATAAGGTTATAGAA890.11705443688924545No Hit
TGTAGAGGGCCCCCGGCCCGGCCTCCGGCGGCTCCGGGGAGGTAGACGAGCT890.11705443688924545No Hit
TGCCATGGGCCAGAAACCACGAATAAGAATGGAAATGACAATGGCTGCCTGT880.11573921849723147No Hit
TTCCTTGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC880.11573921849723147No Hit
GCTCCCTCCTCATCCCTTCAGGATTAGTGGCCTCAGTGGGAGTCTGGCTTTT880.11573921849723147No Hit
CCAGTTGGGATCTACTGTAGTCCTGCAGATGGAAATCCTATCCTACTAACAG880.11573921849723147No Hit
TATTGCGGGTATAAATATTGTTAAATATTCAAGTCTTTAAGCAATTTTACTT880.11573921849723147No Hit
GACAAAGGGAAGTTCCCAGTGCTTTGAGGCTTCTTCAAAATTGAGAATGATG880.11573921849723147No Hit
AGTAATGGGAACCCATACGAGCAGAGAGGGAGCTGCCTTCCGGCCCATCCCA880.11573921849723147No Hit
TTGCCTGGGCGATCTTGGAGAGGGTAAAACAGTCACTGGATCCTTGTTTCCT870.11442400010521747No Hit
GTACAGGGAAGGATAACTAAAATCTGTTGATAACTTTAAACCAGAGACATGA870.11442400010521747No Hit
AAGCCTGGGAAGGTCCACCCCAGCAGCACTTAGTCCTCCTTCCTGGCGGGGG870.11442400010521747No Hit
GCTTGAGGGAAGAAAGAAGCTGCTTGTGTTTTCTGGGTAAGTCCACCCATCT870.11442400010521747No Hit
CTTGATACGGGAGTGCGAATCATGGGAGGCGGCTGGTGGTGGGCTCGGGCCG870.11442400010521747No Hit
CGCAGTGGGGGGGTTTTTAAACCTTCATGAAAACCTGAAGAGTTCACTTTTG870.11442400010521747No Hit
GCAGTAGGGGGCTGAAGGCTGGTTTGCGTCGACATGGCGGTTACCCTGAGTC860.11310878171320347No Hit
TCCACAGGGGAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACGCTGTGC860.11310878171320347No Hit
TGATAAGGGTCCCCCACATGGTAGGTAAGTAAGCAATAAATATTGATTAGTT860.11310878171320347No Hit
AGGCCAGGTGATCAAGAGCCTTAACTGTCATGAGAATAGATTGGAAGATGAA860.11310878171320347No Hit
GGTTTTGGGTAATGCCATTATTATAAAGTAATCAGGAGAATAATCATGTTAA860.11310878171320347No Hit
TTCGTGGGGGTTGTCAGAGAGTTACAACCCTCATGTGCGCTACGGAGCTGCA860.11310878171320347No Hit
GGCACAGGGAGCCAGGCAAAATGTTGCTCAGAAGCCATTCAGGGAATAAAAC860.11310878171320347No Hit
CTCATAGGGCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGAGCCGCAGGGCCG860.11310878171320347No Hit
TGTAATGGGACCGCATTCCTTTGAATTCACAACTAAGTGTCCAATCTCCTGA850.11179356332118948No Hit
CATTGAGGGCAAAATATTTTATTATAAAATATGACCAAAATATTTAAAATGC850.11179356332118948No Hit
TTTGCGGGGAAGACAGTAGTGATGCTCTGAAATGAAAGTTTGTCTTCACAAA850.11179356332118948No Hit
CGCAGCGGGGAGTTCACTGTACAAATTTGACAACTGTCACCAAAATTCATAA850.11179356332118948No Hit
GCACGCGGGGATAGACACCAGGAAGCAACTAGCAGAGAATTTGGTAGTCATA850.11179356332118948No Hit
CTGAACGGGAATCTCTCGGCATGACCGTCGCAGGGGGAGCATCACATAGAGA850.11179356332118948No Hit
AAATCAGGGAGTAACTAAAAGCAATGGAGCAGTGCTGATAAAAGTACCCTAC850.11179356332118948No Hit
CCTCAAGGAAAACTACAAACCACTGCTCAATGAAATAAAAGAGGACATGAAC850.11179356332118948No Hit
CTGCCTGGCTAATTAGCTCTGTGCCACATTCCTAAGCTAGATGTGTCCCTTC850.11179356332118948No Hit
TGAGCGGGGAGGTGGAGCTGGTGGTCCCCGGTCGGGACGAAGGCTCCCGAGG840.11047834492917549No Hit
TTGACAGGATGGAAGAGGTGGAGAATTTAAGATAGAGTGAGCTGATTTTTGT840.11047834492917549No Hit
GACTTTGGGTGCCATCCGCGAGGCAGCCACCAGCAACCTGAAGAAGCTAGTG840.11047834492917549No Hit
TAGGCCGGGCATGTTATGTGAGATAGAGACAAGCAAGTCCATCCTTCAGGTA840.11047834492917549No Hit
CATCCTGGGAGTATTAAAATCTGATGGATCTTAGATAAGAAAAGAATAGCGT840.11047834492917549No Hit
GATTTGGGGATGCATCAACAATTATCAGACCCAAGCACATTCTCCCAACATC840.11047834492917549No Hit
GTCTACGGATTCAGTTTTAAGTACTGACCTGCTAAGTAACTAGTAATTCCAG840.11047834492917549No Hit
TTCAAAGGGATTAAGAAACCGCACGTGATGTCGCTATGCTCTAACGATCACC840.11047834492917549No Hit
GGAGTTGGGGACGTGGGTGGCCAGCGCGATGAACGCCGCAAGTGGATCCAGT830.1091631265371615No Hit
GCACTGGGGGCTGCGGTTGCGAGCGCTGTAGGGAGCCTGTGCTGTGCCGCGC830.1091631265371615No Hit
GTTTACGGGAGCTATTTGTCAAAATTAATATCCATTTCTTTTTATATACGGT830.1091631265371615No Hit
GTTAATGGGCATGTGGGTTTTTGTTTTTCATTATATTTTGGCTTAGGTAATT820.1078479081451475No Hit
ATACTGGGGTCTGTATTAGAAAATAGAAAACTTAGAAAAACAGGTAGTGGCA820.1078479081451475No Hit
CCTAAAGGGATGATTTTTTAATTCTATTTTGATGCTGTAATTCCATTTCATG820.1078479081451475No Hit
AATCGCGGGGCGTCCCAGCGCATCAGCGAGTTAGAGAGGAATGTGGAAGAAC820.1078479081451475No Hit
GCACCCGGGGGGGAGCGGCGCTGCCTGTGGAGATCCGCGGAGGCCGACAGGA820.1078479081451475No Hit
GGCCCAGGGAGTTGCACACTATGTACTTACCATGGCAACCCCAGCGTCACAT820.1078479081451475No Hit
CCTAACTGGGCAACTCAAGATTCTGGCTTCTACTGAAGAAACATAAGGAAAA810.10653268975313351No Hit
GCGCTGAGGGAACGTCCTGCTGGAGACCCTGAGCAGGACCGAAGAAATCCAC810.10653268975313351No Hit
TACGCCGGGCTGGCTTTTTATTGCGGCAGCATTTTTGTTTTAGAAACTACTC810.10653268975313351No Hit
TCACGTGGGCAGCAGTTCCTAAATCTTGCTCTATCATCTGGAGAACAAATTA810.10653268975313351No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGAACGGAAATCCTGTCTCT810.10653268975313351No Hit
CAAACGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA810.10653268975313351No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACGGAA810.10653268975313351No Hit
AGCTGTGGGCAAATGAAAGCTACCAATTTAAAGTTACGGAATCTACCATTTT810.10653268975313351No Hit
CGAGCTGGGAAGTGTTCTGAGCACATTTAAGGTAGGCGAGGCTCAGCTAGGA810.10653268975313351No Hit
CGTATGGGGATGAGTTTCTGCTATCCTCACTGTGATTTGAAATTGTTCTGAA810.10653268975313351No Hit
TGCCGAGGGGGAAGCTAATGGGGAAAAAAGGAACTTTTCGTGACTTGGGAGA810.10653268975313351No Hit
ATACATGGGTATCCTGAGATTTTGCGTTCTAATTTAGGATCAGTTGTGTTAC810.10653268975313351No Hit
AACTAGGGGGTGTGAGCTCTCACATCATACCCCCAGGACTTCCGTCCTTCAC810.10653268975313351No Hit
TGCTAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA810.10653268975313351No Hit
CATTTTGGGTACTATTTGGTGTTGGGTTTGGGGAGGAAAATTGGAAGAAAGG800.10521747136111952No Hit
TCGCTAGGGCTTGCTTTGTTCCTTTCTTTTCCAATTTTCTCTTCATTTCTTA800.10521747136111952No Hit
TTAATTGGGCTGCATCAGCAAACGCTGAGGAGTGGGCAGATTTTCTTTGTCT800.10521747136111952No Hit
ACCAGTGGGGTAAAAGAATATTGCACTGATAGATACTAAATTATTATTTTAT800.10521747136111952No Hit
CTTACCGGGGGTCCCACATGATCCAGGGATAGACCCAGAGTTTCCAGAGGAA800.10521747136111952No Hit
ATGCTGGGGAAAGACCCAGTAGCATCTACTTTGGGAGCTATGCCAAATACAT800.10521747136111952No Hit
TTAAACGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA800.10521747136111952No Hit
CTCGGCGGGTAGCTCACCAGTGGTTTTCTCTAAGGAATCACAAAAGTAAACT800.10521747136111952No Hit
GCCTGCCTCGACCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACT790.10390225296910552No Hit
AGCTGTGGGCGATCTACAAATGGGAGGATCAGCTACAGCTTTATCTAAGTAT790.10390225296910552No Hit
ACGCTGGGGGAAACAAATCAGAGATGGAATAAGAGCGGTAATTGCAGCAAGA790.10390225296910552No Hit
CCACAGGGGAAGTGAAATGAAATGAAATAATGAAATGAAATTGAAATGAGAT790.10390225296910552No Hit
ATGGACGGGATCAAGAACAAGACAATGTTTTGTGCACATTAATTTTTGCACA790.10390225296910552No Hit
TAACAAGGGAGCCTGAGACCGAGGCCGCCAGAGCACAGCCAACCCCTTCGTC790.10390225296910552No Hit
GAATGTGGGGACTGAGAGGACAGACATATGAGACCTGAAGGTTGTACCTTGA780.10258703457709153No Hit
CACTTGGGGATCTAAATGGGACAGACAAGTGTTTCATGCATCACTTCAAGGA780.10258703457709153No Hit
CAAGACGGTTTCTGCATTCATTCAATATACATCGAGTGGGTGTTGCAAGATT780.10258703457709153No Hit
GCGCATGGGTCACTACCCTAAAAAGGGTTACTTCTAACACCATAGATTAATT780.10258703457709153No Hit
GGCATGGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC780.10258703457709153No Hit
TACTCTGGGGTTTATAAGGTTGTTTGTCCAACTAATGAAAATGCGCTTAATA780.10258703457709153No Hit
TGTATAGGGATCAACAGTCATCAAAGGATTTCCAAGTGAATCTTCTAGGATT780.10258703457709153No Hit
GCGTAGGGGATAGTATGAAATAACTAGAAAGTAGCAATGCTGGAATTTGTAC780.10258703457709153No Hit
AATTAAGGGACATGTTCTTAGTGTATTTCCCCTCAAGTCACTTATTATTTAC780.10258703457709153No Hit
GGTCCAGGGGGGGAGAGTAAAGGCAACTTACATGGAATCATGGAAGCCTGTT770.10127181618507754No Hit
ATCTGGGGGTAGTACCTGACTAAAAATGAAGTAATACCCTTAAACCATTTAT770.10127181618507754No Hit
CAGAAGGGACAACAAACTATCCCCCAAAGAAATCAAAACAATAATCCCATTT770.10127181618507754No Hit
GGCTTGGGGGATTTAGATGAAGAGAGCAGACTAATACTGTAATGACACATAA770.10127181618507754No Hit
GATTGTGGCAAGCCTGTTGTCTTAACATTTTGTATAAAAAAGAACAACAGAA770.10127181618507754No Hit
ATGAGTGGGATCCTTTTCCAGTCTTCCGGTCTGACAAATGGAATAATAGAAG770.10127181618507754No Hit
CAACGAGGGGCAGCTAGGACTACAGGCACATGCCACCACACTTGGGTAATTA770.10127181618507754No Hit
AAACAAGGGATGATGGGCATTTGGGTTGCTTCCATCTCTTGGCTATCTGTTG770.10127181618507754No Hit
CAAAAGGGCAGGCTGGAGTGCAATGGCGTGATCTCAGCTCACTGGCAACATC770.10127181618507754No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)