FastQCFastQC Report
Sat 31 Dec 2022
SRR5847208.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5847208.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73135
Sequences flagged as poor quality0
Sequence length52
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGCCGTCT13711.8746154372051687No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGC11731.6038832296438092No Hit
ATCTGAAGACCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGG2160.29534422643057356No Hit
AGGGTAGGGTGTCCCATTCCCTGTATCAAAAGCAGGTAAAGACATTAAATGA2060.28167088261434337No Hit
GAGCAGGGGATTGTGTGTTAAACAACACATCTCCCAGACACAGAAACACACT1420.1941614821904697No Hit
ATCCGCGGGAAGTACCATTTTCTGATGAAAAGGAACCAGACCTGCCTGGAAA1420.1941614821904697No Hit
ATCTGAAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGA1300.17775346961099336No Hit
GGTAGGGGTCTGTGAACATGTATGAAGATATCAACATTATCACTGGTGCACT1260.17228413208450125No Hit
TGGTTTGGGCGATTAAAGAGGGCATCATGCTACTCAGAACTTAAAATATATG1250.17091679770287824No Hit
CTTTGGGACAACAAATAACTTTTTCTTCATGGAACGTACATCCTAGTAGGGA1250.17091679770287824No Hit
TATTCCGGGAAGCAATAATTTGTCCATAGCTTTAAAAAGGTGACATGCACCA1220.16681479455800918No Hit
ATTTACGGGGAGCACCACGCGGAGGCCGCGCAGTTCCAGGAAGATGTCAACG1210.16544746017638615No Hit
GAGAAAGGGGTCTTTCCAAAGCGCTGAGGCTGTGCACCTATTCTGTAGTTGC1190.1627127914131401No Hit
TACCTGGGGGATCCTCCCAGTCGGTGCAGCAAACTTCAGGGAAGCCATGCGC1150.15724345388664798No Hit
TACATAGGGAATCTTACTTGGGTAGAGATGGCCTTTGCCAACAAAGTGAACT1140.15587611950502495No Hit
CGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGT1130.15450878512340194No Hit
ATTATCGGGAACAATATAGATTTGTGATTCTGCAATTTGTAGGGTCATTATA1100.15040678197853286No Hit
TGTGCTGGGAGTGGGTAGGTGTCAAAATTCACTGTTCTCTTTTAATGGGCAC1100.15040678197853286No Hit
TTGCTAGGGAGGAAAGAATAGACCCATATGAAATCATTATAATGCAGTGTGG1070.14630477883366377No Hit
AAAGCCGGGACAAGTATTATGTGTCATTAAAAATAAATTTAAAAAATTCCCA1030.14083544130717168No Hit
CTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCCTGTCTCTTATAC1010.13810077254392564No Hit
TGACTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1000.1367334381623026No Hit
TATAGCGGGGAAAGCAAGAGTTGAATTGCTAGCCATGAGGAAAACGTAAGCC1000.1367334381623026No Hit
GGTTATGGGAGATTTGCAAATGAATAACTCCAGTACAAGGTAAAAAATAGCT990.13536610378067956No Hit
GCTTCGGGGAACCCTCAGTCCACTTTGTTTATAGATTCGTCTGTTCTGCATA970.13263143501743352No Hit
ATGCTGGGATTACAAGTGTGAGCCACCGCGCCCGGCCCAGAATAAATTCCTT970.13263143501743352No Hit
TTAAGTGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA970.13263143501743352No Hit
GCTCAAGGGGCAGAGAGCAGGAACTTGATGCAGTCATAAACCCAAGCAAGTA970.13263143501743352No Hit
GCACTTGGGATGCTTGCTTGATGGTTGGGTTGATTGGAGGTGAATGGAAGGA970.13263143501743352No Hit
AAACCAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA950.12989676625418747No Hit
GTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGTATGCC950.12989676625418747No Hit
CACCATGGGGGTGCAGTCGTCACTCGTGTCTCGCTACCAGCTCCCCGCTGCC940.12852943187256444No Hit
AACAATCGGGGAGGCAGGAGAGGGAAAGGCAGCAGCGGCGGCAGCTGGAGGA930.1271620974909414No Hit
TATACGGGGGAGTGGAGCGGCCGCCGGAGATGCCTGACGCATCTGTCTGAGG920.1257947631093184No Hit
GCATGGGGATGTACGTGGGCAGAAGAGGCCGCTCAAGCTGTGTCCCCCCTGA920.1257947631093184No Hit
TGTCAAGGGAGAGAAAGAAGGTCCAGAAAAGAAGAAGACAAAAAAGGAAGCT920.1257947631093184No Hit
ATTCTAGGGGCATTCCTATTTCCCTAAGATCTACTAGTGATAATTCTACCTT910.12442742872769536No Hit
GTTGCGGGGAAGCACATGTGTTCATTGTGCGTATGTGTGTGCATGTGTGCGC910.12442742872769536No Hit
ATAGTCGGGCAGCAGTACCGGGCGCTCACGGTGCCCGAGCTCACCCAGCAGA910.12442742872769536No Hit
GCCGTAGGGGGTGGCGGGGCCCGGCGGGGAGCGGGTCCGGAGCAGGCTCCCG900.12306009434607233No Hit
CAATATGGGTACCACCTCTCTTATTTATCTAATAGTGAGGCAAAGAAATGAA900.12306009434607233No Hit
GTTTGCGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA890.12169275996444931No Hit
TATTCCGGGGATACCTCAACACAATAAAGGTTGTATATGACAAACCCACAGC890.12169275996444931No Hit
CAAGTGGGGATCCTAATATATTTATTTAAAAAGCTGTGAATAATAAGAATCA880.12032542558282629No Hit
CCGAAGGGGATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTA880.12032542558282629No Hit
TTAAACGGGGACCCTCTGGGGACAAGAGTCTGAGCCGAACACCAGAGACACT870.11895809120120325No Hit
ATGCGTGGGGGTGAAAGCAAAGCAGTCAGCCTCAAATAATTCAGGTGAGGGA870.11895809120120325No Hit
TGGTCCGGAACTGCGGGCTGCAAGCTGGGCTCCCCCCTTACTCCCCAGTGTT870.11895809120120325No Hit
ATTACAGGGACTGCTTATTTGCACATTTATTCTCATTTTAAATAATAAATTA870.11895809120120325No Hit
TTGCATGGAGGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGG870.11895809120120325No Hit
ACACAAGGGACTGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTGCTG870.11895809120120325No Hit
ATGCGGGAAGAATTATAAACCCCAGAATGAGATGGAAATAAACAAGTATTTT860.11759075681958024No Hit
AACGCAGGGGGATGGAAACATTTTCTCACTTCCTTTTTTTCCCCTAGAGTCT860.11759075681958024No Hit
GCAACTGGGCCTTCCAAAAGTCAGTCACAGACCACTGCAACATGCCTTCCCT860.11759075681958024No Hit
TTTCGTGGGACGGCGGGGAACCATGCCAGATGACCTTCTGACCACGTTGGAT850.1162234224379572No Hit
AAAAGTTTCCCCACATTGCCTAAATTTGAGCTCCATGAAATAAAGTGGATTT850.1162234224379572No Hit
GTATTTGGGTGAACTATCCTGCCCGCCATCATCCTAGTCCTCATCGCCCTCC850.1162234224379572No Hit
TACGAGGGGTCTCTGAGTGAAGTTAACACCACGTATTTTACCTTTGCAAAAA840.11485608805633417No Hit
AATATGGGGTCACAAAAGGCAGTTTGTCTACTACAGCAGAAGGCTGGTTAAC840.11485608805633417No Hit
TAGAGTGGGATCCTGAGAGTGCACAGCAGCATTTCCATAGAAAACATTGCTT840.11485608805633417No Hit
ATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGATCTCGT830.11348875367471116No Hit
TCCCCAGATTTGGACCACAGGCTGTAGATTTCTGACCTCTGGCTTACAGCAG830.11348875367471116No Hit
TCATAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA830.11348875367471116No Hit
GTATCAGGGAAGAATACGATGACCACCAAGGAGTGCCTCCACAGATTCTGCT820.11212141929308812No Hit
CGTTTTGGGATTATCTGCAATCTCACTACCCAGAGATAACCCTGTTGATATT810.1107540849114651No Hit
CGACATGGGACTCTAACTATTGTTTCTTGGCCTGGCACTTTTTTATAGAATC810.1107540849114651No Hit
GATTTGGGGCCAACCGCATAGCTGCCTATGCCCCCGCAGAACTGGCTGCTGC810.1107540849114651No Hit
AACGCTGGGAGGCTCCAAAAACTCTTTCACTCTCATTGCACTCTATCCAATG810.1107540849114651No Hit
AGCAATGGGCCCAGGGAGGTGGCGACACCCGCTTCCCGGGCCACCCTTTTCC800.10938675052984208No Hit
GCTATTGGGCAATACCACGGTGGCCGCCCTGGAGGACGAGCTGACGCAGCTA800.10938675052984208No Hit
AGTGTTGGGGATACATTCCTAGAAACAGAGCTTGTAATTTTGTCTCAAAGGA800.10938675052984208No Hit
AGTAAAGGGGACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGT800.10938675052984208No Hit
CTATAGGGAGATCTGGTTGGCTTTTGTGGGCTGACCCAGACATTTAATCACC790.10801941614821906No Hit
TGTACTGGGGGAGTGTTTCTCCTGCGTTGCTCCGAGGGCCCAATCCTCCTGC790.10801941614821906No Hit
ATCGTAGGGCGATCTGTAATTGGGGGTTTTGTTCATCTCCATTATCCAGAAA790.10801941614821906No Hit
TCTACTGGGTGGTGTGACTACTCCACTTTCATATATCTGTTCATATCACTGA790.10801941614821906No Hit
GGCCTTGGGAAGATATACATAACAACAAAGCGCTTACCCTATTTTCCAATTG790.10801941614821906No Hit
GCACAAGGGAGGAAAAACTTGCAATAGAGGGAAAAGCCATTAAAGCAGCTCC790.10801941614821906No Hit
CTCTATGCGGGATTCAGAGGAATTTGAGATTAATCTTTTTATATGGATTCTT780.10665208176659602No Hit
TCAGCTGGGGACAGATGTTGTCATATGAGCATGTGGGAAAATTTAGTAAAAT780.10665208176659602No Hit
TATTACGGGGAAGACTGAAGCGAGAAGGGCAGCGCGAGGTGGGCGACTACCA780.10665208176659602No Hit
AAAGCGGGATGCTCCAGAAAGCACCGATCTGTTGTAGTTGCAAAAACAACTC780.10665208176659602No Hit
TGTCTCTTATACACATCTCCGAGCCCACGAGACGTACTCGGAACTCGTATGC780.10665208176659602No Hit
CTTAAATTCCCAACAGCAGTCAAGTAAACAAAAGGGTTTATTTTTTATTAAT780.10665208176659602No Hit
TTACGCGGGGAAATGAACTGTAGTAGGTGTGTAGTTTGGGGAAGTCAAATGG770.10528474738497301No Hit
TTGACTTGGGGTTTCCTCGTTTGTATCATACACATTTATCTTACAATTCCAA770.10528474738497301No Hit
ATTGGGGGAAGGAAAAAAGGAAGTGTTTGGACGACAGCGAGCGGGAGAAGCG770.10528474738497301No Hit
CTAGTAGGGCTCCTATATCATAGGGCCAGAGGAAGATCTTCCAAGGAAGATG770.10528474738497301No Hit
AAGTTAGGGTGCTAATTGACATCTCTAGTAAATACTGTTACAGGATTCATGA770.10528474738497301No Hit
GAAGCAGGGAGAACTAGAAATACCATTTGACCCAGCCATCCCATGACTGGGT770.10528474738497301No Hit
TCGTAAAGGGTATTTTAATTTAGTTAATGAAGCAAAATTCAGTTTATATTTC770.10528474738497301No Hit
TATGCAAGGGCTCTTTTTCCGGCTGGAACCATGGAGGGTGTAGAAGAGAAGA770.10528474738497301No Hit
ATCATGGGGATTTGCACGCAATTGACTCTTTCAAAGTCTTTCAGTAGGTTAA760.10391741300334997No Hit
AGAATAGGGGTACCCAGTTTATTAATTATCTTTTTACATTCTACAGATGTGT760.10391741300334997No Hit
TGAGCTGGGATTCTCTAGGAACTCACTTTTGAGAGTATTTTTCTCTAACCCA760.10391741300334997No Hit
TAACACGGGAAGGGGGTGGACCCCAAGTTCCTGAGGAACATGCGCTTTGCCA760.10391741300334997No Hit
GAAAGCGGGGGGCAGTGGTGCTGGGAGTGTCGTGGACGCCGTGCCGTTACTC750.10255007862172694No Hit
CTCTCTGGGTATCCAAGTTAGTCCCCCTTATTCCACTGTGGCATTGCCGTTC750.10255007862172694No Hit
GCAGTGGGACTTCCGGCGTGTGCGTCTGGCGTCCGCGCGCTGCACAATGGCG750.10255007862172694No Hit
AGTGCTGGGATTACAGGTGTGATCCACTGCACCCGGCCGGCATTATGATTTT750.10255007862172694No Hit
TTTCAAGGGGGAGTCCCCAGGGAATGAGCCTCAGGATCCACTTCGTCCCTTG750.10255007862172694No Hit
TGTATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAG740.10118274424010393No Hit
ATATTAGGGGGGCATGGTGGGCAGTGGTACCAATAATGCCCGTCTGGCTGCA740.10118274424010393No Hit
AATCAAGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA740.10118274424010393No Hit
TGGTCAGGGACAAGGAAGGGGGACGATGGGAAATCATGGACTTGTAAGTTGT740.10118274424010393No Hit
GTTTATGGGGGGGCTCTTGTCCCGCCCCCACACCGCCTCCCAGCCAGTCCCA740.10118274424010393No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)