FastQCFastQC Report
Sat 31 Dec 2022
SRR5844736.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5844736.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144059
Sequences flagged as poor quality0
Sequence length52
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTCTTATACACATCTCCGAGCCCACGAGACCAGGACTCATCTCGTATGC11830.821191317446324No Hit
CTTATACACATCTCCGAGCCCACGAGACCAGGACTCATCTCGTATGCCGTCT10870.7545519544075692No Hit
GTGCCTGGCCATTATGTTTTAAATATGTCTCCGTTTCTATTTCTAAATATTT2080.14438528658396907No Hit
CAACAAATGAGCTGTGTTAATACATAAGAATAAGAAGGTATGTATATTAGTG1940.13466704614081731No Hit
ATTATAGGGAGATGGAAGAAGAAAAGCAGCAAACAGAAAGGGTTACAAAAGA1920.1332787260775099No Hit
GCTGTTGGGGATTTGAGCAATTTGTATAACATTTTATTCTGCTTTTTCTCCT1880.13050208595089513No Hit
CTCATCATACACAAAAATCAAAATGGATTAAAGACTTAAATCTAAGACCTCA1850.12841960585593404No Hit
CAGTTTGGGTGGCGGGGGGATGGGTCAAAGACTTAACAGTAAGAACTTAAAA1760.12217216557105075No Hit
GTATCCGGGATAGTTTTCATTGTGCAAGTCTTATCCTTCTTTAGTTAAATTT1760.12217216557105075No Hit
CATACGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCA1760.12217216557105075No Hit
GCATCCGGGAACTGAAAGGTTTTTTTAATAAAATGCCATTTTGTGGAAACTG1730.12008968547608966No Hit
GATCTGGGGCATTTCAACAGCTGAGGCAAGCCAAGTGATCATTAATAAAGCT1730.12008968547608966No Hit
TATAGGGTAAATCTACAACAACAATGGAAGACATTCTTATTTTTGCAACTGG1730.12008968547608966No Hit
AGCATTTCTGCATGGTCAAGTGAGCTTTATGCTCATGAGCTTTAAGTATATA1720.11939552544443596No Hit
GGCAACGGGCAGCTTTGGTTACCATAGCCTTGAAGTATAATTTGAAGTCATG1710.11870136541278227No Hit
AGAATCGGGATGCTTCATGAAGTCCATCACACATAAAGGCAAAAAAAGAACT1700.11800720538112856No Hit
GCGGCTGGGCGATCTAGCATGGGGATCATTTTTTCTTTAGGCTATATAAAAT1700.11800720538112856No Hit
ATCAGAGGGTGAGGTTATTTAATTTCCTGTCAGTCTTTCCCATAATGGTTTT1690.11731304534947486No Hit
CTTGGCGGGATTGCCTATAAATTGAGTCTGGTAAGTTTGAGTGAGAGATATT1690.11731304534947486No Hit
TTTATTGGGGCTGGGCGCTATGTTCGTGAGAACTGCAAACCGCTGCGGCGGT1690.11731304534947486No Hit
TGTAACGGGGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTA1690.11731304534947486No Hit
AACAAGGGGTGTGGATCCCCGTCCTGCTGTCAGGAAGAGTGCAGGGCAAACT1680.11661888531782118No Hit
CAACTAGGGGATGGAAAGGAAAAACTGGTACCAGCCACTGCAAAAATGTACT1660.11523056525451376No Hit
GTCTTGGGATTGAACTGTAACCTCATTCAAAACTTACCCATGTAATATTCTT1660.11523056525451376No Hit
GCACTGGGGTGATTCTTATGATGTTTATGAACAACAAATTATCCTTTAATTA1650.11453640522286009No Hit
TGACGTCGGGATGTGAGCTCTATATAATTTTCTTCTTTCAGGATGACTTATA1650.11453640522286009No Hit
GCACGAGGGATAACTTTGAAAAAAACATAATCTGTTAGATCGGTGAAGGATT1640.11384224519120638No Hit
CCAACAGGGCCATTTTATGTATGTGCATTTGGTATCATGGGCCGTGGAACAG1630.11314808515955267No Hit
TCTACAGGTGGGAAATAGTTCTCATTGGCTCTAGTACTATTTGTTAGCTCCA1630.11314808515955267No Hit
ATCTGTGGGAGAAGACTTAAATAATACTTATGAGTTTAAATGTAATTTTTAT1620.112453925127899No Hit
GGCGCAGGGGTAGTAGTATTGAACCAAAAATAGTCAAGTAAATAATGTCTCA1610.11175976509624529No Hit
ACAGCTGGGCCGATCTTCCGTGGGATTGTAATGGCTAGAAGAGACCTGCCAG1610.11175976509624529No Hit
AATCAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1610.11175976509624529No Hit
AATCGCGGGACATGAAGCTTTTCCGTGCCCAGAGGAATCTCTACATTGCTGG1600.11106560506459158No Hit
TGAAGTCGGGAAGATGTAACTGTTGGAAACTCTACCCTGATTTTCCTTTCTA1600.11106560506459158No Hit
AGCAGCGGGATTTCTCAATTACTTTACATAGCCAATTCAGCGGATTAATACA1600.11106560506459158No Hit
ACGTAAGGGGAATGCAAATGTCCTTTGTGGTGCTTGTTCCTTGAAAATGTTT1590.1103714450329379No Hit
AGCTCTGGGGAAATCCAAGTAAGATTTTCACAGTGGAAGCTTTGCAACAGTT1590.1103714450329379No Hit
GTACATGGAGAGGCCAGGATGTCAGTTCCAGGATGTGCGAGAAACTTATAGA1590.1103714450329379No Hit
CCGCGGGGGAAATAATTTATTATTACTAAGTCCTCAAAAGCAATTGCAACAA1590.1103714450329379No Hit
TGCGACGGGTCATACTGAAGCCAAGAATATGAAGCAAAATTTAGGAGAAATG1590.1103714450329379No Hit
ATTCAAGGGCGTCATCACAGCAGCTTTGATGAAGAAAATGGATGCACCTCTA1580.1096772850012842No Hit
TCAATTAAGCCTCCGCAGTTAGGATTTCTATTATTTGCATCCAAAAGCAATT1580.1096772850012842No Hit
TTTGTAGGGGAGTGTGGCCCGGGCGTCCGCTCCTCAGCGGATGTGGCAGCCC1580.1096772850012842No Hit
TATTAGGGAAGTCAATTATTAAGCAGAACTTTCCCTTCATTAGACAACCTAG1560.1082889649379768No Hit
AGCGTAGGGCAGAGGCTGGGTGCAGTCAAGACAAAAGTAAAATGGTTTACCT1550.10759480490632312No Hit
TTACATGGGAGGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGG1550.10759480490632312No Hit
ATAACGGGGGACCTGTATGAGGCCTCACAGGAGAGTGCGTGGCTCGAGTGGG1550.10759480490632312No Hit
TTGGTAGGGCTCTCTCCTGCTTGCGCTTAGTGTCCTACATGGGGTTGTGAAG1540.10690064487466941No Hit
GCTGAAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1530.1062064848430157No Hit
TCAGCGGGATCCTGACATTAATGAGTCTTCTTATTCATTAACATGAAATATC1530.1062064848430157No Hit
TAAGTTGGGTATCTAAGAGCAGGTTTTCTGTATAAATCATTCTGCTAACTTT1520.10551232481136202No Hit
CTTTGCGGGCTGTTCCTTAATTCTTCCACTATAACTTGTGTGTATTTCTTTA1520.10551232481136202No Hit
TATCCTGGGGATATCTAGCAAGGCCAGGGGAAGTTTTCTTCAATTATTTCCC1520.10551232481136202No Hit
ACGCTTGGGGGAGAAAGTTCATTAAAACATTCAGTGTATCTTGAGAAATTTA1510.10481816477970832No Hit
GTAGATGGGATGGGGGTGTGGGTAACAAACTTTGATCGTGTATGAACAATAA1510.10481816477970832No Hit
ATCTTGGGGCGATCTTGGGTAGGGTCTCTGACTGGGCTACAATAATTCCTTC1500.10412400474805461No Hit
GGCAACTGGGAACATAATATGTTGTCTTTTATATTTTTATTTAAATCTGGAT1500.10412400474805461No Hit
GGCTTTGGGTATCCACACTTTTTGTATGATATAAGTATTATTTTGCAGACAA1500.10412400474805461No Hit
CTGCTAGGCTCGGCTCACTGCAACCTCCCCGTCCCGGGTTCAAGAGATTTTC1500.10412400474805461No Hit
TACATAGGGAAGTATTATTGAATATTTACTGTAAATATATGTTCACATAAAA1500.10412400474805461No Hit
ATTCAGGGGTAACTCCACTGCAACATTTTTTGCCTTCTAGGACCTCTGATCC1500.10412400474805461No Hit
TAAGGCAGGGCCAGCTGGAGAAGCTGAGGGCTATTTTTGCAATTATAATCTG1500.10412400474805461No Hit
GGCGATGGGTGCCTTTTCCTCTCCTGAATATTAAATTGAACTCTATTTAATG1490.10342984471640093No Hit
CAATTTGGGAACGAGAGGCAAGTATTGACTCCTCACATAGACAACAAATGAA1490.10342984471640093No Hit
TGGTGTGGGCAACAGTGAGTGAATGAATGACTAAATTGTTTGTTTTTAGCAT1490.10342984471640093No Hit
TCCCGGGGGGCCCAAATCCTGCCCTACATTTCCTCCATCTGCTAGATAGATT1480.10273568468474722No Hit
TCTGAGGGGAGAATCTAAGATGTACATTTTTACCTTTTAGGCAATTTCAATA1480.10273568468474722No Hit
GTCACTGGGGAAGGCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAA1480.10273568468474722No Hit
TCCGCGGGGCCCAGCACTTTGAGAGGCTGAGGCGGGCGGATCACTTGATGTC1480.10273568468474722No Hit
TCGAATGGGAGGGTGATGATCTTCTGAAGCTCTTGGATGTCATTTGATCGGA1480.10273568468474722No Hit
ATCAATGGGGAGAAGGCGACGATGACCGGACTGTGTGCCGGGAGATCCGCCA1470.10204152465309352No Hit
TTACATGGGGAAATTTTTTATAAATCCTACAATTAAATATTATTTGCTTAAT1470.10204152465309352No Hit
TTCTTAGGGATTGAAAGCACATTTAGATTATTAATCAAGTTAATAAAAGATT1470.10204152465309352No Hit
CGCACGGGGCAGACGACATGATTGTATATCTAGAAAACCCCATTATCTCAGC1470.10204152465309352No Hit
TCGTCTTGGGCGTTCTCCTCGGACCTTCGTAGCCATATCACTTGTATAAAAT1460.10134736462143981No Hit
CATTGTGGGGAGTCAATAGCTTGTCTTCGTCCATCTGTTGACAAATGACAGA1460.10134736462143981No Hit
CTATATGGGTTCTTATACCTCCTAGCCATAAATACTGAAGTCTTATTTTGAA1460.10134736462143981No Hit
TTATTAGGGGAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGC1450.10065320458978613No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)