FastQCFastQC Report
Sat 31 Dec 2022
SRR5843051.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR5843051.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69941
Sequences flagged as poor quality0
Sequence length46
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTCCGGGGAGATCATATTTTGCCGACAAAATATGGATTGAAAGA1090.1558456413262607No Hit
ATTCTAGGGAGGGAATTCTGAGCTGAGATTGTCCTTGTCACCATCC1090.1558456413262607No Hit
GCTTATGGGGGCAATCCCCGACGCTGGTACCGCCCGCCGGACGGAC1010.14440742911882873No Hit
CTGTAGGGGGGGAATTCCAATGATAGGCTAGTCTCGCGCAGTACAT1000.1429776525928997No Hit
CAAATAGGGCGCGCCATCGAGAAGCTGGCAGTAGAAGCTCTGTCCA990.14154787606697072No Hit
TTCACCGGGACAGTAGTCTTCAGCACGGTTTTTAAAGATGACGACG970.13868832301511272No Hit
ACTAACGGGGGCATTTGGGTAAAAGTCGCACGGAAGAGCAGCGTCT950.13582876996325474No Hit
TAGGATGGGGTTCTGTGCCCGTGCTAGCTGATAGACACCGTCGGTT940.13439899343732575No Hit
TAACCAGGGCCCTCTGGTGGAGGTGTCAAGGTCCAGGATGTCACCC940.13439899343732575No Hit
TATTTTGGGGGGAATTCCTCTGTGTCATGATCGTGAGTTGTCGCAG920.13153944038546775No Hit
ATCTATAGGGGTCCGGGACAAGTTTATCTTGTGACTGCTCGGGCTG910.13010966385953876No Hit
TCTACTGGGAAGAAATTAGCGGTGATTAAGAAGAGATCAGCATCAT910.13010966385953876No Hit
ACTAACGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCT900.12867988733360974No Hit
CAAACTGGGAGTCCACATCTGACAGAACTTGCCACTGTGCCTGCAA900.12867988733360974No Hit
GATGCCCTTTGAGCTTTGCTTCCTGGTGCAGAGGTCAGAGTTCAAG900.12867988733360974No Hit
TATTTAGGGGAAGAGGACGAGAAAAATAACCGTCCGCGACGCCGAG890.12725011080768076No Hit
TGTCTTGGGGACGCAGTTTTGCTCCTTGGATTCTGAGCCCGGGCAT890.12725011080768076No Hit
TTTCATAGGGGGAATTCCTCTGTGTCATGATCGTGAGTTGTCGCAG880.12582033428175177No Hit
GGATTCGGGATTCAGAGAAACGGATGTGAAAAGCATAGAGGTGTGC860.12296078122989378No Hit
ACATATGGGGATCTTCGGTGAGACTGGATGAAGTCCGGAGAGGCGA860.12296078122989378No Hit
GCCACAGGGGCGGGCTGCCCGACCGCTCTTGCTGCTGCCGGTGGAT860.12296078122989378No Hit
TTACAGGGGGGGAATTCACACCGGCGCACGCCACAGGCGTCATACT850.12153100470396476No Hit
TACTTCGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC840.12010122817803577No Hit
TGCAATGGGGACTGTCATCCGCCGGCACGCAGGTCCGCGGGGAGGG830.11867145165210678No Hit
GCCTGTGGGACTGTGCCTGCAACCTTGTCTGAGAGGAACCCTTCTC830.11867145165210678No Hit
GGACCAGGGAGTGCGGAGAGCTGTGTAGCCAGAGCCCAGGGCTGTC830.11867145165210678No Hit
GCCATAGGGGAATTGGGGACATTCAAATGAGCATCCTAGTCACCGC820.11724167512617778No Hit
CGCTGTGGTGACGGCAGCGGGACCGGGATGGAAGGGAGCGCGGTGA820.11724167512617778No Hit
AAATCTGGGAGAGGGAGAAAATGCCATGGTATGATTGAACCTGTGT820.11724167512617778No Hit
TCATTCGGGATGACCCACCAAACTCATGCATATCACATAGTTAATC810.11581189860024879No Hit
TCGAACGGGGCCCATGCCAGTGCCTGGCCACGATGTGGAAGCCTAC800.11438212207431978No Hit
TACTTAGGGGACTTTCCGGGTAAAGATGGCAGAGCGCGGTTACAGC790.11295234554839079No Hit
AACTTTGGGGAATAGTATGAGCAATAATGTCTATTGGCTTTCTAGG790.11295234554839079No Hit
GGTTAAGGGGAGAGGTGTTAGCGGCGGCTGCAGCAAGAGCGTTTGG790.11295234554839079No Hit
ACTGGTGGGGGTGCCTGCAACCTTGTCTGAGAGGAACCCTTCTCTG790.11295234554839079No Hit
TGCGTCGGGGCCGGTGCAGCGGGAGATTCACCAGGACTGGGCGAAC780.1115225690224618No Hit
CTCAAAGGGAGTTAAGGGAATATCTGCCATGTGGCTTTTGCGAGTT780.1115225690224618No Hit
TAACGCGGGATGCCACAACTAGATACATCAACATGATTTATCACAA780.1115225690224618No Hit
TTCAGAGGGGCCATTACTGCCGGAAAAGGTCCAGCAGAGCTCAGCA780.1115225690224618No Hit
CTCACGGGGGCGGGCAGGGGGCACGGGAGACGGCGGCTGAGCCGCG780.1115225690224618No Hit
AGGTTAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC780.1115225690224618No Hit
CAAGTTGGGATGCCACAACTAGATACATCAACATGATTTATCACAA780.1115225690224618No Hit
TAGTAAGGGGTGTGTGCATGCGCACTTGCTCAAGCCTGTGTGTGTG780.1115225690224618No Hit
CGCACTGGGGCGCACGGGTGGACGGAGACTATTAACACGCGGCTCT780.1115225690224618No Hit
CCTAGCTAAAGGAGAGGGGGAAGGAAGAGAGAAAGCAGTGTATCTT770.11009279249653278No Hit
AATTGTGGGGGTATCCGGAGCTGGGGAATTCATGTGGAGGTCAGAG770.11009279249653278No Hit
TAGTATGGGAGACAAGTCTGAGAACGTTCAGGATTTGCTGCTCTTG770.11009279249653278No Hit
ATCTCTGGGGAAAAAAGAGAAGGTCCTTGCTACTGTCACCAAAACA760.1086630159706038No Hit
TTCTCTGGGGACGGTATCAACAGGAACATCCTCGTGTTAGATATTG760.1086630159706038No Hit
GCATTAGGGGAGAGTGAACCGCGGAGAAGGTGAAGATGGTTGCCGC760.1086630159706038No Hit
GGAGATGGGCAGGCGCAGGCACACATACTTCTGCATGCAAGAGCAA760.1086630159706038No Hit
ACACTTGGGAGCTGATGGGTTTTTAATTGCTTAAAAAGGGAGGGAG760.1086630159706038No Hit
TACACAGGGCGCTCTTCCGATCTTGCTGTTTGCGTAACCACATTCA750.10723323944467479No Hit
TTACAGGGACTGAAATGGCTCGGAAACTTGACTCGCCATTATCAAG750.10723323944467479No Hit
TTAAACGGGGGGTTTCTGAGGCCACAGGCTCATCTTCCAATACCCC750.10723323944467479No Hit
GCTCTTGGGGTCCTGACTCCTCTCAGCTTTTTCTTGACATTTAAAA750.10723323944467479No Hit
CTTATTGGGGCTGCTCAGACCCTGGAGGCTAAGGACTTGTTTCGGA750.10723323944467479No Hit
TTTTCGGGGGTCCCAAGGGGACTTAAGCGCGGTGGCCTCCCCTATC740.1058034629187458No Hit
TAAGCAGGGGAAGCCGAAGAGGGCCGCTTCCGGCCGCTGCGCCCGT740.1058034629187458No Hit
AAATATGGGAGACGGCTGAGGAGGATGTGGGCTACGCGCGGGCTGG740.1058034629187458No Hit
TGCAACGGGCCCAGTGAAAATGTCAATCTCAATCTCGGTGTGGCGT740.1058034629187458No Hit
CCAGTAGGGCCAGGACTCAGCAGTATCTTCCTGCCCCGCATGAATC740.1058034629187458No Hit
CGACAGGGGACTAAGGAGGGCCTGGAGCTACCAGAGGACGAGGAAG740.1058034629187458No Hit
ATTCTGGGGAGCACATCAGGGACAGAATGAAACTGGTCAGTCTCAA740.1058034629187458No Hit
TATAATGGGGAGGGCCAGCTCATACACAGCCCTGCAGTCCTGTGCG740.1058034629187458No Hit
GTCCTTGGGGGGAATTCGAGCTCTTTCGACGTTTTGAAGGAGGGTT740.1058034629187458No Hit
CGACCCGGGCGATCTTCATTGGGGGGGAATTCCTCCTCATGTGAGC740.1058034629187458No Hit
TCACGGGGCGAGATCAATGTGGAAGGGCCACCCAGGATCAAGGTCG740.1058034629187458No Hit
CATTACGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACA730.10437368639281681No Hit
AAGCTGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTC730.10437368639281681No Hit
CAACCAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC730.10437368639281681No Hit
CTGACAAGGAATACATTTCCCAGCAGCTGAAGACAAGGAGCGTCCC730.10437368639281681No Hit
CAAACAGGGGCGCGGTGAGCTGAGCAGCATGGCGTCGGTGGCGCTA730.10437368639281681No Hit
AACATTGGGTCTTCCGATCTTGTCTAGGGACGCGCGGGAGCCATAT730.10437368639281681No Hit
CAAGCTGGGGAGGGGACCCAATTCTCTACCAGCATCTGTTCTGATT730.10437368639281681No Hit
TCCATCGGGGGGAATTCAGATAAAACGAATAGCTCGTAACCAAACA730.10437368639281681No Hit
TAGTGGGGGAGAAAAGCTTAAAAGACTCCAAGAAAGGAAAACCCTG720.1029439098668878No Hit
ATAGCTGGGGGGGAATTCGAGCTCTTTCGACGTTTTGAAGGAGGGT720.1029439098668878No Hit
TACAAAGGGATCCCCAGCGGTGAGGGAGCCATGTCCGCGCTACTGG720.1029439098668878No Hit
GCTTATGGGGAGTGGGGCAGCTCCTGGACGAGGCGACATGGCGGCG720.1029439098668878No Hit
GGAAGGGGGAGACTGCCCCAGTGAGCTGGAGCATTGAAGAAGAGTC720.1029439098668878No Hit
ATCGCGGGGATCCTGGCGTTTGCCTACAGGAAGATGGCGGCGGTCT720.1029439098668878No Hit
CAACCAGGGGACAGAAATTTACACAAGAAGCCATGTTGCCAGCCCT720.1029439098668878No Hit
AACCGGGGGACCTGCGGGGCCGCCTCTTCTGGGTGGCTTTGGATCT720.1029439098668878No Hit
GTGACTGGGGAAGCCAGCTCCTCCCAGACCTCTCAGTTCCAGCCCC710.10151413334095881No Hit
CCGGCTGGGGAGCCGCGGAGGCGGAGCAGGCGCTGCGGCAGGAGGG710.10151413334095881No Hit
GCAGCTGGGGCGTGGATGAGAACATTGAGAGGAGAAACCACTACCT710.10151413334095881No Hit
TCAAATGGGGAAGACAAACTCAAGGGCGAGATGATGGATCTCCAGC710.10151413334095881No Hit
TCTGCCGAGCACCTGGCCAGCCTCATCCGTCTCACGCCGACACAGG710.10151413334095881No Hit
AACACTGGGTCGTTTATGAACTAGCCTATCGCAGACGGTATCAACA710.10151413334095881No Hit
ATTCTGGGAGCCCTGGGTGCTGGGAAGGATGGTGTACGTTGGGGAA710.10151413334095881No Hit
TGTAAAGGGATGCCACAACTAGATACATCAACATGATTTATCACAA700.1000843568150298No Hit
TGATTAGGGATGCCACAACTAGATACATCAACATGATTTATCACAA700.1000843568150298No Hit
TAGTTAGGGGAGAGTGAACCGCGGAGAAGGTGAAGATGGCTGCCGC700.1000843568150298No Hit
CTACTTGAGGTCCCTTGTCAGACCCCGAGTGGCAGAGGAAGGTTGT700.1000843568150298No Hit
ACAGTCCGGGGAGTGGGCCGGGCGCGGTCTCTCCTTAGCTCCCGCC700.1000843568150298No Hit
GATTCTGGGATGGCCTACCCATTCCAACTTGGTCTACAAGACGCCA700.1000843568150298No Hit
TAGCTAGGGCACCGGCGCACGCCACAGGCGTCATACTTCCCAAGAA700.1000843568150298No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)