##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841250.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2980703 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.59243138279795 39.0 37.0 39.0 31.0 39.0 2 37.20281222248577 39.0 37.0 39.0 33.0 39.0 3 37.39399497366896 39.0 37.0 39.0 33.0 40.0 4 37.84697636765555 39.0 37.0 40.0 33.0 41.0 5 38.30227567120911 40.0 37.0 41.0 34.0 41.0 6 38.225317651574144 40.0 37.0 41.0 33.0 41.0 7 38.17617756616476 40.0 37.0 41.0 33.0 41.0 8 38.08387148937683 40.0 37.0 41.0 33.0 41.0 9 37.968064580738165 39.0 37.0 41.0 33.0 41.0 10 37.889642476959295 39.0 37.0 41.0 33.0 41.0 11 37.57403270302341 39.0 36.0 41.0 32.0 41.0 12 37.84319001255744 39.0 36.0 41.0 33.0 41.0 13 37.93057275414558 39.0 36.0 41.0 33.0 41.0 14 37.953451249587765 40.0 36.0 41.0 33.0 41.0 15 37.88420147864447 40.0 36.0 41.0 33.0 41.0 16 37.934437949705156 40.0 36.0 41.0 33.0 41.0 17 37.82913527446377 40.0 36.0 41.0 33.0 41.0 18 37.8896226829711 40.0 36.0 41.0 33.0 41.0 19 37.83763930857922 40.0 36.0 41.0 33.0 41.0 20 37.67168885997699 39.0 35.0 41.0 33.0 41.0 21 37.63634585532339 39.0 35.0 41.0 33.0 41.0 22 37.54362242732671 39.0 35.0 41.0 32.0 41.0 23 37.43373559861549 39.0 35.0 41.0 32.0 41.0 24 37.16638759379918 39.0 35.0 41.0 31.0 41.0 25 37.176017970619284 39.0 35.0 41.0 32.0 41.0 26 37.136054611691804 39.0 35.0 41.0 32.0 41.0 27 37.07157530206424 39.0 35.0 41.0 32.0 41.0 28 37.04358971081488 38.0 35.0 41.0 32.0 41.0 29 36.94861242546483 38.0 35.0 41.0 32.0 41.0 30 36.88646586921587 38.0 35.0 40.0 31.0 41.0 31 36.687830820693506 38.0 35.0 40.0 31.0 41.0 32 36.63357190926245 38.0 35.0 40.0 31.0 41.0 33 36.49591761415141 38.0 35.0 40.0 31.0 41.0 34 36.427094582433405 37.0 34.0 40.0 31.0 41.0 35 36.399459064097464 37.0 34.0 40.0 31.0 41.0 36 36.32135739809037 37.0 34.0 40.0 31.0 41.0 37 36.23752893257862 37.0 34.0 40.0 31.0 41.0 38 36.084048917379185 37.0 34.0 40.0 31.0 41.0 39 36.03262963408699 36.0 34.0 40.0 31.0 41.0 40 36.015276355596704 36.0 34.0 40.0 31.0 41.0 41 35.86950031944157 36.0 34.0 40.0 31.0 41.0 42 35.64370804758213 36.0 34.0 40.0 30.0 41.0 43 35.59247027481088 36.0 34.0 40.0 30.0 41.0 44 35.54825954837997 35.0 34.0 39.0 30.0 41.0 45 35.348478802571634 35.0 34.0 39.0 30.0 41.0 46 35.12993016658626 35.0 33.0 39.0 29.0 41.0 47 35.149092074074694 35.0 34.0 39.0 30.0 40.0 48 35.10209467391756 35.0 33.0 39.0 29.0 40.0 49 35.42286888864731 36.0 34.0 39.0 30.0 41.0 50 35.701303763395956 36.0 34.0 39.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 92.0 14 527.0 15 3598.0 16 948.0 17 5.0 18 1.0 19 1.0 20 6.0 21 16.0 22 68.0 23 197.0 24 510.0 25 1190.0 26 2879.0 27 6482.0 28 13363.0 29 26099.0 30 47185.0 31 78741.0 32 124118.0 33 184551.0 34 273607.0 35 278590.0 36 320052.0 37 367664.0 38 392300.0 39 453042.0 40 404871.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 39.004422782142335 20.656268001206428 40.339309216651245 2 27.459528842692478 20.61463352772819 27.692896608618838 24.232941020960492 3 29.089245053935265 20.142295290741817 24.158596143258823 26.609863512064102 4 24.785059095119507 21.86662005573853 28.58017051682103 24.768150332320932 5 23.332247459743556 24.82468062064553 24.81203259767914 27.03103932193177 6 22.299504512861564 24.035504375981105 23.890739869084577 29.774251242072758 7 28.082234291709035 21.03091116424548 21.659588358853597 29.22726618519188 8 24.321779123918084 22.276221414880986 25.86101332470897 27.540986136491963 9 26.017855519318765 26.31869059077674 25.268669840638264 22.39478404926623 10 34.326767879926315 20.130653741751527 21.984075568750054 23.558502809572104 11 24.95538804100912 19.326380387445514 26.163995540649303 29.55423603089607 12 26.962129403701073 22.31520550688881 22.865042240035322 27.857622849374795 13 27.359854369925486 21.700551849681098 23.074590121860513 27.865003658532906 14 22.53897822090963 21.360095252697096 21.506939805810912 34.59398672058236 15 23.764058344625415 27.758082573137948 25.87892856148365 22.59893052075299 16 22.85323294538235 28.495257662370253 20.101432447311925 28.55007694493547 17 22.46859214084731 33.17579778998444 19.422062513440622 24.933547555727625 18 23.274878443105536 23.11625814447129 19.285819486208457 34.323043926214716 19 28.776701335221926 21.359826859636804 20.768288554746984 29.095183250394285 20 25.101561611472196 20.036581974118185 23.226165102662023 31.6356913117476 21 23.953946434784008 28.509046355842898 20.780097849399954 26.756909359973136 22 27.004636154625267 22.335435633808533 23.88131256284172 26.77861564872448 23 29.813369530610736 21.247470814770878 25.083310883372146 23.855848771246247 24 25.286887019605775 21.734738415736153 26.945824525288163 26.032550039369905 25 25.572135805803203 27.22240567942954 20.999443319102536 26.206015195664715 26 24.99863811242382 30.236117258520306 22.903374076469987 21.861870552585884 27 24.379684602131185 26.091484861121785 23.082811145374933 26.4460193913721 28 24.006140982108032 21.82197439345883 20.86469146021403 33.30719316421911 29 24.295384546821282 23.161210444916566 25.464201879160235 27.079203129101913 30 24.482200130706254 23.92608466720245 24.361666936194233 27.230048265897068 31 24.32767756534361 29.392863786933614 22.82875875616017 23.45069989156261 32 27.670551950981437 24.389238369913826 21.830571266252235 26.109638412852497 33 23.341613932701964 21.30732750310073 26.072521072003084 29.278537492194225 34 24.80865643651734 27.18609930560394 26.336755962748786 21.668488295129936 35 21.971130326987414 22.728857708318316 22.070653166198383 33.22935879849589 36 21.898441944216334 24.791362776802625 28.04865631799478 25.261538960986258 37 22.06086320148242 29.748274468083522 21.13967372166208 27.051188608771977 38 26.62092785343557 25.95102630763888 22.53210320328118 24.895942635644364 39 26.78920282993519 27.20065911724612 24.811699709573627 21.198438343245073 40 26.82848171871309 23.19500891728205 24.82511784437253 25.151391519632334 41 26.62648519150513 27.801660480013435 22.292978177461638 23.278876151019805 42 21.799544303817186 32.050800272124846 21.62531898148671 24.52433644257126 43 25.681988696437386 23.342510228551138 22.253839692210555 28.721661382800917 44 26.54501694230872 21.970315390038735 21.533145800827125 29.951521866825427 45 22.602191733041114 22.622645550611544 29.34596406798704 25.429198648360302 46 20.148169425100832 27.148614195246317 30.168509373520585 22.534707006132262 47 22.988952451148727 31.083103699546875 22.920899885252904 23.007043964051494 48 26.16112985173527 27.75316872843022 21.317069243583582 24.768632176250925 49 21.614947896676348 28.354324786628183 22.088115295104263 27.942612021591206 50 20.551061931823877 29.525613655270572 28.30448393487754 21.618840478028016 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4183.0 1 3307.5 2 2182.0 3 1799.0 4 1638.0 5 1736.5 6 1822.0 7 1411.0 8 1052.0 9 1594.0 10 2377.5 11 2597.0 12 2648.5 13 3045.5 14 3790.0 15 4888.0 16 5693.0 17 7054.0 18 8392.0 19 11417.0 20 14102.5 21 11644.5 22 10431.0 23 16610.0 24 23010.0 25 23528.5 26 24715.0 27 30307.0 28 35894.5 29 42723.5 30 48670.0 31 59152.5 32 72423.5 33 70162.0 34 72282.0 35 82756.0 36 84091.5 37 88185.5 38 95771.0 39 105412.5 40 110026.5 41 109323.5 42 116366.5 43 122722.5 44 127612.5 45 139268.0 46 152201.0 47 151345.5 48 155857.0 49 195094.0 50 260923.0 51 277042.0 52 220850.5 53 179362.0 54 174075.0 55 175495.5 56 181844.5 57 180349.0 58 171127.0 59 168991.0 60 167865.0 61 164842.0 62 156544.0 63 144243.0 64 132371.0 65 119646.0 66 153825.5 67 193392.0 68 145059.5 69 96775.0 70 90426.0 71 83070.0 72 72368.5 73 63419.5 74 56684.5 75 46094.0 76 37948.0 77 30193.0 78 25059.0 79 23231.0 80 20061.0 81 14972.0 82 10314.5 83 7860.0 84 6504.5 85 5326.0 86 4460.5 87 3558.0 88 2410.0 89 1670.5 90 1082.5 91 537.0 92 337.5 93 240.5 94 120.0 95 21.0 96 25.0 97 25.0 98 322.0 99 619.0 100 619.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 22096.0 25 21507.0 26 21164.0 27 21285.0 28 22517.0 29 21467.0 30 23229.0 31 23439.0 32 24007.0 33 24216.0 34 22735.0 35 22355.0 36 24268.0 37 22743.0 38 21353.0 39 22129.0 40 23474.0 41 28780.0 42 27501.0 43 24252.0 44 27653.0 45 44574.0 46 56099.0 47 127174.0 48 457730.0 49 905017.0 50 897939.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.697109419268854 #Duplication Level Percentage of deduplicated Percentage of total 1 67.67421644984088 5.885700653275505 2 13.23933810478612 2.3028794427204087 3 5.658485826074687 1.4763741113026037 4 2.9389334214669764 1.0224090216977793 5 1.8056915910278466 0.7852148672311423 6 1.1783561917390426 0.6148975640656441 7 0.8764758545720308 0.533596448739209 8 0.6520371612857807 0.45366708297055114 9 0.4838473786997195 0.37872662353000874 >10 3.450984433734073 6.031396157870658 >50 0.5786943393734193 3.5292513426624463 >100 0.7750645959982921 16.69120034371801 >500 0.5636482701610267 35.86422423730531 >1k 0.11921103044473462 14.017822037724956 >5k 0.0023147772901890213 1.2369357303382893 >10k+ 0.002700573505220525 9.17570433484745 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 88294 2.9621871082090365 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAA 71073 2.3844374967918642 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 62959 2.112219835387826 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAAC 15715 0.5272246178166694 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 12493 0.4191293127829241 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAG 11609 0.3894718796203446 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 11325 0.3799439259798779 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCATAC 7761 0.26037481761852826 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 7164 0.24034598549402605 No Hit CGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAG 5636 0.1890829109777123 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGG 5635 0.18904936184517546 No Hit ACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCA 5443 0.18260792839809936 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGG 5226 0.17532776663760194 No Hit CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT 4786 0.16056614832138594 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 4553 0.15274920044029883 No Hit CTCTTCCGGGGACGTTGTCTGCAGGCACTCAGAATGGTCCAGCGTTTGA 3906 0.1310429116889539 No Hit TCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA 3561 0.11946846096373909 No Hit CTCTTTCCCTAAGCAGCCTGAGGTGATCTGTGAAAATGGTTCGCTATTC 3506 0.1176232586742121 No Hit TTTCTTGCTGCAGCAACGCGAGTGGGAGCACCAGGATCTCGGGCTCGGA 3400 0.1140670506253055 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 3365 0.1128928309865156 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAAT 3327 0.11161796395011511 No Hit AGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCGTCTCGGA 3227 0.10826305069642968 No Hit CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC 3178 0.1066191432021238 No Hit CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAA 3069 0.10296228775560665 No Hit AGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGG 3056 0.10252614903262754 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.026235421643820266 0.0 0.0 0.0 0.0 2 0.047841062997554605 0.0 0.0 0.0 0.0 3 0.06471627666359245 0.0 0.0 0.0 0.0 4 0.08477865792063148 0.0 0.0 0.0 0.0 5 0.10853144375672451 0.0 0.0 0.0 0.0 6 0.14667680745112813 0.0 0.0 0.0 0.0 7 0.18881451791741746 0.0 0.0 0.0 0.0 8 0.25316175412310454 0.0 0.0 0.0 0.0 9 0.2974466090717525 0.0 0.0 0.0 0.0 10 0.34404635416544355 0.0 0.0 0.0 0.0 11 0.3872576368729122 0.0 0.0 0.0 0.0 12 0.4439556708601964 0.0 0.0 0.0 0.0 13 0.5008549996427017 0.0 0.0 0.0 0.0 14 0.5565801087864172 0.0 0.0 0.0 0.0 15 0.6208266975944936 0.0 0.0 0.0 0.0 16 0.6797725234617471 0.0 0.0 0.0 0.0 17 0.7449920371133923 0.0 0.0 0.0 0.0 18 0.8107818860181641 0.0 0.0 0.0 0.0 19 0.878182093284705 0.0 0.0 0.0 0.0 20 0.9500778843111843 0.0 0.0 0.0 0.0 21 1.0143580222517976 0.0 0.0 0.0 0.0 22 1.074041929034862 0.0 0.0 0.0 0.0 23 1.131679338733178 0.0 0.0 0.0 0.0 24 1.1869683091539143 0.0 0.0 0.0 0.0 25 1.2418546899842084 0.0 0.0 0.0 0.0 26 1.2990559609595453 0.0 0.0 0.0 0.0 27 1.3505203302710804 0.0 0.0 0.0 0.0 28 1.4054067111013744 0.0 0.0 0.0 0.0 29 1.4696868490419877 0.0 0.0 0.0 0.0 30 1.5301423858733996 0.0 0.0 0.0 0.0 31 1.5904301770421274 0.0 0.0 0.0 0.0 32 1.6462559335834532 0.0 0.0 0.0 0.0 33 1.7010416670161368 0.0 0.0 0.0 0.0 34 1.769280602596099 0.0 0.0 0.0 0.0 35 1.8256431452580146 0.0 0.0 0.0 0.0 36 1.8886148670296907 0.0 0.0 0.0 0.0 37 1.945782588872491 0.0 0.0 0.0 0.0 38 1.9934223570748244 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTC 10 0.008717918 135.31743 44 GTCAATC 135 0.0 130.30568 44 ATTCACG 90 0.0 127.799805 44 CTATCAT 7310 0.0 121.711655 44 ACTACCC 140 0.0 120.819145 44 TAAGCCA 1470 0.0 115.98638 44 ACCCGAT 115 0.0 111.783966 44 CGTTCGG 20 5.088909E-4 101.488075 44 AATCGCA 910 0.0 95.168304 44 CCGGCAT 50 3.3833203E-10 94.722206 44 TATGGGA 135 0.0 90.211624 44 TAGAGTC 155 0.0 87.30157 44 GGTAAAG 195 0.0 86.74194 44 CGACGGG 785 0.0 84.46566 44 ACTTCTA 1785 0.0 82.63082 44 AATCACG 115 0.0 82.367134 44 CCCATAC 1760 0.0 79.9603 44 TCCGTAA 195 0.0 79.80259 44 TTAGTAG 165 0.0 77.910034 44 CAACGAA 275 0.0 76.26983 44 >>END_MODULE