##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841239.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2615393 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 34.57958937719876 37.0 33.0 39.0 25.0 39.0 2 35.79144396272377 37.0 35.0 39.0 31.0 39.0 3 35.8975668283887 37.0 35.0 39.0 32.0 39.0 4 36.35454289278896 37.0 35.0 39.0 32.0 40.0 5 36.89292928443259 38.0 35.0 40.0 33.0 41.0 6 36.432500584042245 38.0 34.0 40.0 31.0 41.0 7 36.60449500323661 38.0 35.0 40.0 32.0 41.0 8 36.173100945058735 38.0 34.0 40.0 31.0 41.0 9 36.24380657132599 38.0 34.0 40.0 31.0 41.0 10 36.18144653595081 38.0 34.0 40.0 31.0 41.0 11 35.7520846771403 37.0 34.0 40.0 30.0 41.0 12 36.3767349687026 38.0 35.0 40.0 31.0 41.0 13 36.771503938413844 38.0 35.0 40.0 32.0 41.0 14 36.761692793396634 38.0 35.0 40.0 32.0 41.0 15 36.50145656885982 38.0 35.0 40.0 31.0 41.0 16 36.779791794196896 38.0 35.0 40.0 32.0 41.0 17 36.756380781014556 38.0 35.0 40.0 32.0 41.0 18 36.65304946522377 38.0 35.0 40.0 31.0 41.0 19 36.751278297372515 38.0 35.0 40.0 32.0 41.0 20 36.661170233307196 38.0 35.0 40.0 31.0 41.0 21 36.52413270204516 38.0 35.0 40.0 31.0 41.0 22 36.41586254914653 38.0 34.0 40.0 31.0 41.0 23 36.33536833661327 38.0 34.0 40.0 31.0 41.0 24 36.104694782007904 37.0 34.0 40.0 30.0 41.0 25 36.17431206843045 37.0 34.0 40.0 31.0 41.0 26 36.09897189347669 37.0 34.0 40.0 31.0 41.0 27 36.063551300965244 37.0 34.0 40.0 31.0 41.0 28 36.0957028448482 37.0 34.0 40.0 31.0 41.0 29 35.945455306954344 36.0 34.0 40.0 31.0 41.0 30 35.96778409329173 37.0 34.0 40.0 31.0 41.0 31 35.686598996556945 36.0 34.0 40.0 30.0 41.0 32 35.648859319626595 36.0 34.0 40.0 30.0 41.0 33 35.4790073812145 36.0 33.0 40.0 30.0 41.0 34 35.477575890160956 35.0 34.0 40.0 30.0 41.0 35 35.52232801873694 35.0 34.0 40.0 30.0 41.0 36 35.45083821277029 35.0 34.0 39.0 30.0 41.0 37 35.25363414693136 35.0 33.0 39.0 29.0 41.0 38 35.12415799938921 35.0 33.0 39.0 29.0 41.0 39 35.085866604845585 35.0 33.0 39.0 29.0 41.0 40 35.1260513404989 35.0 33.0 39.0 30.0 41.0 41 34.90716572815592 35.0 33.0 39.0 29.0 40.0 42 34.650346746900134 35.0 33.0 39.0 29.0 40.0 43 34.533736417392156 35.0 33.0 39.0 28.0 40.0 44 34.658284359207364 35.0 33.0 38.0 29.0 40.0 45 34.27575579304844 35.0 33.0 37.0 28.0 40.0 46 34.20878129879356 35.0 33.0 37.0 28.0 40.0 47 34.203045559973155 35.0 33.0 37.0 29.0 40.0 48 34.167781239035904 35.0 33.0 37.0 29.0 40.0 49 34.368310694440474 35.0 33.0 37.0 28.0 40.0 50 34.789264245195156 35.0 33.0 39.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 51.0 15 356.0 16 170.0 17 3.0 18 0.0 19 0.0 20 12.0 21 46.0 22 143.0 23 514.0 24 1257.0 25 3110.0 26 6744.0 27 13625.0 28 26161.0 29 47205.0 30 80584.0 31 128963.0 32 193622.0 33 277909.0 34 333670.0 35 238355.0 36 261804.0 37 283941.0 38 295209.0 39 285156.0 40 136783.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 41.095468252763546 22.378166493525065 36.52636525371139 2 26.37045369472198 23.03519968127161 26.226460038701642 24.36788658530477 3 28.28565343716986 21.31067873929463 23.608153726801287 26.79551409673422 4 24.1755254372861 21.60956307522426 28.415805961092655 25.799105526396986 5 24.651515087789868 24.74939712693274 24.7744793994631 25.82460838581429 6 23.370369194992875 24.806367532527617 24.066019905995006 27.757243366484502 7 29.222529845419025 22.984729254838566 20.579201672559343 27.213539227183066 8 25.167154611180802 24.07905809949021 25.326709982018 25.427077307310984 9 28.3967266104941 26.833672797931325 23.296384138062617 21.47321645351196 10 32.70445397689755 21.212529053950973 23.147764026285916 22.935252942865567 11 26.213957137608002 20.686298388043404 26.809240523317147 26.290503951031454 12 28.336162098774448 23.120540584149303 22.427222218611124 26.116075098465124 13 29.858724864676166 21.383860857622544 22.946799964670703 25.810614313030584 14 21.06738834278443 22.49432494466415 21.434140108197887 35.00414660435353 15 24.07890515880405 27.940542778848148 26.511923829420663 21.468628232927138 16 21.98927656378984 30.489146373030746 19.917733204914136 27.603843858265275 17 23.45983949639691 32.80275660292736 20.539934151387573 23.197469749288157 18 22.859891419759858 24.94145239357909 21.530454505307613 30.668201681353434 19 27.828016669005386 22.843794412541442 21.80570950522541 27.522479413227764 20 24.323457315975077 21.07377361643164 23.776350246406565 30.826418821186717 21 23.48908940262515 27.13829240959198 22.726833022800015 26.645785164982854 22 25.069349042381013 23.420189623509735 23.842573563514165 27.66788777059509 23 30.310741062624242 23.26445776982656 25.115995951660036 21.308805215889162 24 26.526376724262857 21.95012374813269 26.950060660099652 24.57343886750481 25 24.49183633796753 28.646343598442204 21.797037530004797 25.06478253358547 26 24.573717404416545 29.56511894374596 22.656211875440416 23.204951776397078 27 24.199742454905966 25.706633441142905 23.46930894693373 26.624315157017392 28 23.713881584189973 22.581679815124712 22.08028528169575 31.624153318989563 29 23.649108507058408 25.566158626705406 25.123251305404693 25.661481560831493 30 23.29842452332029 26.529419931284348 23.43045726157668 26.741698283818682 31 24.652318671384748 29.908786136875953 23.058937048520605 22.379958143218694 32 27.830277653207684 25.17728857470854 22.31589615725895 24.676537614824827 33 22.53136152789371 23.970037137709387 25.944762605889643 27.55383872850726 34 23.78743647179648 26.621982875847984 27.68052735271948 21.910053299636058 35 23.33889094992206 21.524115379219104 23.64803157942758 31.488962091431254 36 23.42804366532075 23.6404422591376 28.197001436737207 24.73451263880444 37 21.846217439771685 29.48310397066034 23.051949051364193 25.618729538203784 38 26.60399643840354 26.415781268545352 22.101902022312878 24.87832027073823 39 28.25016690793062 27.405069148854917 23.356552180855413 20.98821176235905 40 26.011759017397672 25.433214997882324 24.549016506977427 24.006009477742573 41 28.225073596906153 27.688783927932658 22.09509762639359 21.9910448487676 42 22.116955106528263 32.656627243475015 21.997470672319874 23.228946977676845 43 26.322666774927843 24.95734855787614 23.349528450187744 25.370456217008268 44 26.928996391346683 24.12449448053204 22.171084644576062 26.77542448354522 45 23.70238525601451 23.30705555453253 27.236559129363624 25.75400006008934 46 19.27988416578895 27.248518155828588 30.14743208676712 23.32416559161534 47 23.875559953007272 30.614542757941106 24.180448446035946 21.329448843015676 48 25.58948297309079 29.603591439233657 21.269070882549943 23.537854705125618 49 23.159989861891557 28.039985657636613 21.982998046218867 26.817026434252973 50 20.016266295158854 30.083666227938515 27.193191760120893 22.706875716781735 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7287.0 1 5877.5 2 3478.5 3 2732.0 4 3034.0 5 2865.0 6 2735.0 7 2613.5 8 2406.0 9 3004.5 10 3858.5 11 4465.0 12 4872.5 13 4473.5 14 4313.5 15 5473.5 16 6740.0 17 8398.0 18 9718.0 19 13140.0 20 16443.5 21 14975.0 22 14676.5 23 19962.0 24 23865.0 25 23857.5 26 25288.5 27 29003.5 28 33646.5 29 41356.0 30 51407.5 31 62646.5 32 71122.0 33 66703.0 34 64039.5 35 78151.5 36 88993.5 37 86165.5 38 81716.5 39 81305.0 40 89598.5 41 101779.5 42 107775.0 43 117797.5 44 126854.0 45 124235.0 46 124002.0 47 125073.0 48 133262.0 49 165508.0 50 213516.5 51 234101.0 52 210806.5 53 176814.0 54 164036.0 55 171814.0 56 176436.5 57 164699.5 58 145162.5 59 133103.5 60 132517.0 61 137031.5 62 137847.0 63 133426.5 64 126092.0 65 120181.0 66 149414.0 67 174925.5 68 125763.0 69 80804.5 70 71335.0 71 62215.5 72 56032.5 73 49201.5 74 41943.5 75 34618.5 76 29725.0 77 25005.0 78 22059.5 79 19504.5 80 14712.0 81 9919.0 82 6858.5 83 4934.5 84 3488.5 85 2343.5 86 1816.5 87 1519.0 88 1184.0 89 1019.0 90 907.0 91 569.0 92 266.5 93 196.0 94 164.5 95 124.0 96 114.0 97 114.0 98 306.5 99 499.0 100 499.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 27890.0 25 25998.0 26 23697.0 27 28008.0 28 26662.0 29 26929.0 30 26973.0 31 27643.0 32 27187.0 33 24859.0 34 26009.0 35 25971.0 36 23512.0 37 24502.0 38 23775.0 39 25254.0 40 22783.0 41 29344.0 42 30063.0 43 24201.0 44 30539.0 45 36559.0 46 42047.0 47 103848.0 48 377901.0 49 723713.0 50 779526.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.623704652830387 #Duplication Level Percentage of deduplicated Percentage of total 1 68.74226045599727 6.615552117964592 2 12.596663878550945 2.424531455563024 3 5.246615258721784 1.5147562703091522 4 2.7244143337168785 1.0487583559851568 5 1.6967815793545664 0.8164662390035715 6 1.1178209897194415 0.6454547435876675 7 0.8378674819391564 0.5644372429075197 8 0.6207880013625624 0.47794243017073346 9 0.4886193521056935 0.42320954990902787 >10 3.8041665598432624 7.488751982466327 >50 0.6455728490587871 4.3690091457694695 >100 0.8899937813605199 21.5023676578939 >500 0.5229655835190212 35.12176978285444 >1k 0.06269238406373699 9.32000542820883 >5k 7.935744818194557E-4 0.5312385146831916 >10k+ 0.001983936204548639 7.135749082723406 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAA 67720 2.589285816701352 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 51739 1.9782495403176503 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 43050 1.6460241348049793 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 14310 0.5471453047400525 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAAC 10051 0.384301709150403 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAG 7246 0.2770520529801831 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 6666 0.2548756534868756 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGG 4891 0.18700822400304656 No Hit CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC 4842 0.1851347005975775 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 4452 0.1702229836969052 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCATAC 4002 0.1530171565038218 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 3939 0.15060834069679013 No Hit CGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAG 3723 0.1423495436441101 No Hit CCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG 3613 0.1381436747746897 No Hit AGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCGTCTCGGA 3481 0.13309663213138523 No Hit CTCTCTGCTCCTCCTGTTCGACAGTCAGCCGCATCTTCTTTTGCGTCG 3414 0.1305348756381928 No Hit CCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAATGACGAAC 3226 0.12334666338863796 No Hit ATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTAACCACTC 3041 0.11627315665370366 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTG 2944 0.11256434501430569 No Hit TGGAGAAGGGTTCCATGTGAACAGCAGTTGAACATGGGTCAGTCGGTCC 2891 0.11053788092267587 No Hit CTCTTCCTGCTCTCCATCATGGCGCAGGATCAAGGTGAAAAGGAGAACC 2771 0.10594966033785362 No Hit ACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCA 2768 0.10583495482323307 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGG 2743 0.10487907553472843 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.03024402068828662 0.0 0.0 0.0 0.0 2 0.05402629738628191 0.0 0.0 0.0 0.0 3 0.07517034724800441 0.0 0.0 0.0 0.0 4 0.09769086328517358 0.0 0.0 0.0 0.0 5 0.13634662171230097 0.0 0.0 0.0 0.0 6 0.18387293993675138 0.0 0.0 0.0 0.0 7 0.22570221760171416 0.0 0.0 0.0 0.0 8 0.30064315382047746 0.0 0.0 0.0 0.0 9 0.35772826492997417 0.0 0.0 0.0 0.0 10 0.4125192657470598 0.0 0.0 0.0 0.0 11 0.4681132051664893 0.0 0.0 0.0 0.0 12 0.5281424244845804 0.0 0.0 0.0 0.0 13 0.5882481141457517 0.0 0.0 0.0 0.0 14 0.6502655623839324 0.0 0.0 0.0 0.0 15 0.7143094747137428 0.0 0.0 0.0 0.0 16 0.7798827939051607 0.0 0.0 0.0 0.0 17 0.8576531328178977 0.0 0.0 0.0 0.0 18 0.9214293989469269 0.0 0.0 0.0 0.0 19 0.995299750362565 0.0 0.0 0.0 0.0 20 1.0610642454116839 0.0 0.0 0.0 0.0 21 1.1252228632561148 0.0 0.0 0.0 0.0 22 1.1795932771862585 0.0 0.0 0.0 0.0 23 1.235837214521871 0.0 0.0 0.0 0.0 24 1.2844341175494467 0.0 0.0 0.0 0.0 25 1.3368545377310408 0.0 0.0 0.0 0.0 26 1.3993690431992438 0.0 0.0 0.0 0.0 27 1.4489600606868642 0.0 0.0 0.0 0.0 28 1.4975187285428997 0.0 0.0 0.0 0.0 29 1.556592068572486 0.0 0.0 0.0 0.0 30 1.6069860246624503 0.0 0.0 0.0 0.0 31 1.6581829193547586 0.0 0.0 0.0 0.0 32 1.7038739493452801 0.0 0.0 0.0 0.0 33 1.7507885048250875 0.0 0.0 0.0 0.0 34 1.8063442090729769 0.0 0.0 0.0 0.0 35 1.8578852203091467 0.0 0.0 0.0 0.0 36 1.9096556425745577 0.0 0.0 0.0 0.0 37 1.9577937235436509 0.0 0.0 0.0 0.0 38 1.9964877171423185 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCGG 15 1.766488E-4 132.39984 44 GACAATC 100 0.0 125.77985 44 CTATCAT 5580 0.0 113.77371 44 TAAGCCA 1710 0.0 108.784676 44 GACACGC 490 0.0 106.730484 44 GACTAGT 130 0.0 96.75374 44 AATCGCA 385 0.0 96.290794 44 ACTTCTA 1100 0.0 86.059906 44 CCGCACA 190 0.0 83.62096 44 GCCGACC 120 0.0 77.233246 44 ACCACTC 880 0.0 75.22719 44 TGGACCC 170 0.0 73.98815 44 TGCGACA 75 0.0 69.12193 43 AAAGTCG 240 0.0 68.95825 44 AGCGAAT 545 0.0 66.80727 44 ATCTAAC 120 0.0 66.24185 43 CGATGTA 120 0.0 66.24185 43 CTGATTC 205 0.0 64.58529 44 GAGCGAA 305 0.0 62.32305 43 CGTTGAT 95 0.0 61.845943 43 >>END_MODULE