##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841236.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4557356 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.81911573289425 39.0 37.0 39.0 32.0 39.0 2 37.37680027630056 39.0 37.0 39.0 35.0 39.0 3 37.31575896199463 39.0 37.0 39.0 33.0 39.0 4 37.79297996469883 39.0 37.0 40.0 34.0 41.0 5 38.25976070335519 40.0 37.0 41.0 34.0 41.0 6 38.14362933244627 40.0 37.0 41.0 33.0 41.0 7 38.12593069314752 40.0 37.0 41.0 33.0 41.0 8 37.98946801610408 39.0 37.0 41.0 33.0 41.0 9 37.925939733477044 39.0 37.0 40.0 33.0 41.0 10 37.926756654516346 39.0 37.0 40.0 33.0 41.0 11 37.595835392275696 39.0 36.0 40.0 32.0 41.0 12 37.95194296868623 39.0 37.0 41.0 33.0 41.0 13 38.09914059818895 39.0 37.0 41.0 33.0 41.0 14 38.111506320770204 40.0 37.0 41.0 33.0 41.0 15 38.0756324500434 40.0 37.0 41.0 33.0 41.0 16 38.08499270190874 40.0 37.0 41.0 33.0 41.0 17 38.05165144000161 40.0 37.0 41.0 33.0 41.0 18 38.12926354667048 40.0 37.0 41.0 33.0 41.0 19 38.08274907643818 40.0 37.0 41.0 33.0 41.0 20 37.972923554798 40.0 37.0 41.0 33.0 41.0 21 37.92086222801115 40.0 37.0 41.0 33.0 41.0 22 37.861971283349384 40.0 36.0 41.0 33.0 41.0 23 37.7646363373851 39.0 36.0 41.0 33.0 41.0 24 37.52717606436715 39.0 36.0 41.0 32.0 41.0 25 37.45832259303568 39.0 35.0 41.0 32.0 41.0 26 37.51066936987558 39.0 36.0 41.0 32.0 41.0 27 37.43320665031844 39.0 35.0 41.0 32.0 41.0 28 37.42257791665911 39.0 35.0 41.0 32.0 41.0 29 37.38091648780769 39.0 35.0 41.0 32.0 41.0 30 37.33117780867481 39.0 35.0 41.0 32.0 41.0 31 37.087980218156645 39.0 35.0 41.0 31.0 41.0 32 37.09057043078805 39.0 35.0 41.0 31.0 41.0 33 36.988113646636045 38.0 35.0 40.0 31.0 41.0 34 36.90200558959855 38.0 35.0 40.0 31.0 41.0 35 36.90529868628608 38.0 35.0 40.0 31.0 41.0 36 36.84974324447081 38.0 35.0 40.0 31.0 41.0 37 36.77743297858471 38.0 35.0 40.0 31.0 41.0 38 36.64052231168848 38.0 35.0 40.0 31.0 41.0 39 36.62052910375228 38.0 35.0 40.0 31.0 41.0 40 36.602592218708345 38.0 35.0 40.0 31.0 41.0 41 36.49423762177914 38.0 35.0 40.0 31.0 41.0 42 36.21246066463073 37.0 34.0 40.0 30.0 41.0 43 36.17090105355687 37.0 34.0 40.0 30.0 41.0 44 36.20082801697396 37.0 34.0 40.0 30.0 41.0 45 36.01457508580778 37.0 34.0 40.0 30.0 41.0 46 35.803548369090926 37.0 34.0 40.0 30.0 41.0 47 35.7506076323499 36.0 34.0 40.0 30.0 41.0 48 35.76727163269089 36.0 34.0 40.0 30.0 41.0 49 35.87277318191149 37.0 34.0 40.0 30.0 41.0 50 35.90163719247676 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 281.0 15 3188.0 16 3763.0 17 108.0 18 0.0 19 0.0 20 2.0 21 41.0 22 62.0 23 181.0 24 521.0 25 1328.0 26 3209.0 27 7012.0 28 14951.0 29 29897.0 30 56425.0 31 99287.0 32 161814.0 33 249241.0 34 352079.0 35 387007.0 36 488439.0 37 580732.0 38 637722.0 39 770721.0 40 709343.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 41.10958195936416 22.05179933277102 36.838618707864825 2 26.825422459864885 22.502850336905873 28.198521247846337 22.473205955382902 3 28.9776572205463 21.674277804937773 24.09730554295078 25.250759431565147 4 23.622732128014576 23.52339821598313 27.63181107642238 25.222058579579915 5 22.312476795756137 25.105806963511302 26.32412302220849 26.25759321852407 6 24.35339701353153 23.99983674744742 22.135115185208264 29.51165105381278 7 28.272182379432287 20.668409490063976 21.856247350437403 29.203160780066334 8 25.109515254020092 22.613045809895034 25.79502237700983 26.482416559075045 9 26.271965587064077 25.943002916603398 25.31369065747771 22.471340838854807 10 32.60669124817109 20.757079324064215 21.818791422043834 24.81743800572086 11 25.343861660138028 21.031821959925885 25.95739722769079 27.666919152245296 12 27.599753014686584 21.964775189824977 23.45212882206262 26.983342973425824 13 27.664154391274238 22.648000287886223 22.09759342917253 27.590251891667013 14 22.33935641630805 22.340607141509246 20.8943519005318 34.4256845416509 15 25.420441150526752 26.74236991799631 24.87848217255795 22.958706758918986 16 23.40271420534187 27.711967202035563 22.16085379329594 26.724464799326626 17 22.51733241818282 33.11255473568446 19.901078607859468 24.46903423827324 18 24.737040512086395 24.318727788656407 20.849172195457193 30.09505950380001 19 28.427952523349063 23.54393644033953 19.9314251508989 28.09668588541251 20 25.29183588027795 20.38091823416911 24.058949970114252 30.268295915438685 21 24.826017541750083 28.103290592176695 20.687192310629232 26.38349955544399 22 26.803896820875966 22.21046589294319 23.969029410912817 27.01660787526803 23 31.146261121580142 21.651435613105495 25.18131126907795 22.020991996236415 24 26.732671312050233 22.445690000956695 25.186687193188327 25.634951493804742 25 25.19438187107085 28.030351472691173 21.079621726163676 25.6956449300743 26 26.08408484637861 28.701511710621325 23.9564789016091 21.25792454139097 27 24.668435550241107 26.556061957711446 22.92985063010854 25.845651861938908 28 24.678605119460116 21.592370698256627 22.40813725668051 31.320886925602743 29 24.11541655077306 24.909557274602832 24.63326386192323 26.34176231270088 30 25.118095928140377 25.410494329714204 23.026857769688355 26.444551972457063 31 24.537877829300424 29.48140811891063 23.291743578483548 22.688970473305396 32 26.178531888002336 25.42590003487079 22.614389575744948 25.781178501381923 33 24.395377100438182 22.389118433330186 25.027612811207923 28.187891655023712 34 25.630811456337288 27.453328093582087 25.841913585169273 21.07394686491135 35 23.14597757896131 22.71870145821041 22.788878586824328 31.346442376003953 36 22.75887228677341 24.241574138978798 27.374229624113404 25.625323950134387 37 21.420582477829438 30.108198819987862 23.273406400374842 25.197812301807854 38 25.886351529348683 26.324315207224657 22.12912323673187 25.660210026694784 39 25.562188028742362 28.340478312029056 24.005954994997975 22.091378664230607 40 24.896424872541814 25.30329341822736 24.628345108167828 25.171936601063 41 26.938387367862354 26.418072754060407 22.84036008445421 23.803179793623023 42 23.0378007155129 30.856230781532407 21.933034830749136 24.172933672205556 43 24.85202801978166 24.380551787014788 23.536891614173033 27.230528579030516 44 26.0651261659123 22.50711393021411 22.04849776307144 29.379262140802155 45 22.424767883113574 23.813725487602223 28.81125304887809 24.950253580406116 46 21.14924693832204 27.05955472162319 28.74762370424121 23.043574635813556 47 24.638988452725478 29.464930169874094 24.28124345149967 21.614837925900765 48 26.626788340898276 26.401676473643406 21.495758599732447 25.475776585725868 49 22.173865331444137 27.450412935614448 22.14409422624032 28.231627506701095 50 19.849498525306064 29.788883157249497 28.561677908992944 21.799940408451498 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 12388.0 1 9983.0 2 5876.0 3 4674.0 4 5302.0 5 5162.0 6 4734.5 7 4370.0 8 4360.0 9 4509.5 10 4552.0 11 5514.5 12 6798.5 13 8192.0 14 9675.0 15 10791.0 16 11865.0 17 14404.0 18 16460.5 19 17122.5 20 19149.0 21 19534.5 22 20155.0 23 27952.5 24 34070.5 25 43443.5 26 56638.0 27 61353.5 28 61593.0 29 62489.0 30 68860.5 31 86901.0 32 99768.0 33 97442.0 34 110980.0 35 136047.5 36 142721.0 37 144654.5 38 154578.5 39 163748.5 40 167000.0 41 166394.0 42 170232.5 43 194980.5 44 228003.0 45 234672.0 46 233014.0 47 234675.5 48 238458.0 49 288424.0 50 392675.5 51 420164.0 52 338174.5 53 269906.5 54 259032.5 55 266581.0 56 270881.0 57 271206.5 58 257120.5 59 245893.0 60 244896.5 61 247579.5 62 237496.5 63 212900.5 64 198502.0 65 194697.0 66 224495.0 67 251562.5 68 202077.0 69 152090.0 70 140678.0 71 126981.0 72 110211.0 73 96739.5 74 79662.5 75 60661.5 76 51153.0 77 44865.5 78 41543.5 79 37887.0 80 30875.0 81 24284.5 82 19461.5 83 14644.5 84 11315.0 85 8324.0 86 5627.0 87 4397.5 88 3409.0 89 2813.5 90 1978.5 91 1037.0 92 517.0 93 369.5 94 394.5 95 358.5 96 206.0 97 84.0 98 267.5 99 451.0 100 451.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 37773.0 25 36516.0 26 37325.0 27 35902.0 28 34419.0 29 33400.0 30 42725.0 31 37850.0 32 37863.0 33 35089.0 34 36144.0 35 35204.0 36 36510.0 37 37150.0 38 38109.0 39 36036.0 40 35375.0 41 38299.0 42 41390.0 43 34307.0 44 40301.0 45 53281.0 46 75743.0 47 165711.0 48 596227.0 49 1365001.0 50 1523706.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.044042946391775 #Duplication Level Percentage of deduplicated Percentage of total 1 67.69711667130154 6.122556305221457 2 13.384829541977956 2.421059464155639 3 5.636797551647198 1.529383174116398 4 2.950726693711452 1.0674599576396389 5 1.7461212133294397 0.7895997621478582 6 1.1916627857936104 0.6466469647400563 7 0.8425899991416371 0.5334294096906023 8 0.6101712529224109 0.4414732012867169 9 0.4746344243766892 0.38633527061088435 >10 3.5108990805651654 6.412828086245072 >50 0.53219202041537 3.421393054922489 >100 0.7586026028176324 17.02124398645194 >500 0.5621700554750874 36.77330575436687 >1k 0.09639969068465522 12.572785739130618 >5k 0.0031487336153279344 1.781013030220725 >10k+ 0.0019376822248171905 8.079486839053065 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 115026 2.5239634560038757 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 86012 1.8873223860501571 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAA 70942 1.556648196893111 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 33711 0.7397052150413529 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAAC 20781 0.4559880772974505 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAG 15606 0.3424353945577216 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 14074 0.308819411957284 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCATAC 12680 0.2782315008965725 No Hit CCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG 9803 0.21510279205750002 No Hit ATTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCAC 7521 0.1650298989150727 No Hit CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG 7007 0.15375142955696242 No Hit ACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCA 6446 0.14144166047155413 No Hit ATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTAACCACTC 6315 0.13856718676355323 No Hit CTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTT 6143 0.13479306861259027 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGG 5999 0.13163334178852826 No Hit CTCTCTGCTCCTCCTGTTCGACAGTCAGCCGCATCTTCTTTTGCGTCGC 5691 0.12487503719261783 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGG 5445 0.1194771705348452 No Hit CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAA 5367 0.11776565183847829 No Hit TTTCTTGCTGCAGCAACGCGAGTGGGAGCACCAGGATCTCGGGCTCGG 5310 0.11651492663728708 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 5228 0.11471563775136286 No Hit TGGAGAAGGGTTCCATGTGAACAGCAGTTGAACATGGGTCAGTCGGTCC 5029 0.11034907082088825 No Hit CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC 4721 0.10359076622497781 No Hit CCATCTCATCCCTGAGCCATGATCAAACTCTACGTACTGAGTCGGAGACA 4636 0.10172564969688565 No Hit CTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG 4584 0.10058463723264102 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.041646954944928594 0.0 0.0 0.0 0.0 2 0.07712805407345838 0.0 0.0 0.0 0.0 3 0.10260335159245844 0.0 0.0 0.0 0.0 4 0.12801282146929052 0.0 0.0 0.0 0.0 5 0.15730612223403218 0.0 0.0 0.0 0.0 6 0.20740095792384883 0.0 0.0 0.0 0.0 7 0.25251483535628994 0.0 0.0 0.0 0.0 8 0.32420113767719705 0.0 0.0 0.0 0.0 9 0.3773679300015184 0.0 0.0 0.0 0.0 10 0.4318732177165883 0.0 0.0 0.0 0.0 11 0.493641488617523 0.0 0.0 0.0 0.0 12 0.5588327969111915 0.0 0.0 0.0 0.0 13 0.6220053908450426 0.0 0.0 0.0 0.0 14 0.683620063914252 0.0 0.0 0.0 0.0 15 0.7558988150146708 0.0 0.0 0.0 0.0 16 0.8219458826565228 0.0 0.0 0.0 0.0 17 0.9121516949740156 0.0 0.0 0.0 0.0 18 0.9805027300917462 0.0 0.0 0.0 0.0 19 1.0623703744012976 0.0 0.0 0.0 0.0 20 1.1316649390567688 0.0 0.0 0.0 0.0 21 1.2042947709154168 0.0 0.0 0.0 0.0 22 1.2700785279885969 0.0 0.0 0.0 0.0 23 1.3310349246361268 0.0 0.0 0.0 0.0 24 1.3877783521849072 0.0 0.0 0.0 0.0 25 1.4440829287859014 0.0 0.0 0.0 0.0 26 1.5148257015690676 0.0 0.0 0.0 0.0 27 1.566829538881755 0.0 0.0 0.0 0.0 28 1.6208301480068708 0.0 0.0 0.0 0.0 29 1.6890714703876546 0.0 0.0 0.0 0.0 30 1.7464731743581146 0.0 0.0 0.0 0.0 31 1.8060691330675067 0.0 0.0 0.0 0.0 32 1.8597625465291718 0.0 0.0 0.0 0.0 33 1.914158121507295 0.0 0.0 0.0 0.0 34 1.9831235479519265 0.0 0.0 0.0 0.0 35 2.039515894742478 0.0 0.0 0.0 0.0 36 2.099046025809702 0.0 0.0 0.0 0.0 37 2.1553944875054745 0.0 0.0 0.0 0.0 38 2.20584040395352 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAGTG 140 0.0 117.15748 44 TCGATTG 120 0.0 116.43427 44 CGGTTAA 105 0.0 115.71108 44 CTATCAT 10405 0.0 106.900696 44 CGTATGT 80 0.0 106.309555 44 TGCGTAG 120 0.0 101.24719 44 TAAGCCA 4635 0.0 94.89058 44 ATTAGTC 705 0.0 91.3379 44 CCTTATA 335 0.0 87.04237 44 CCAATAG 85 0.0 85.76234 44 CGACGGG 1265 0.0 73.95448 44 CGTCTAA 25 0.0018943466 72.89799 44 CCGTCGT 220 0.0 71.79347 44 AGATCGT 175 0.0 69.42665 44 ACGAACA 175 0.0 69.42665 44 ACTTCTA 2620 0.0 68.39983 44 CCCATAC 2540 0.0 66.72749 44 CGCATAT 130 0.0 64.04011 43 CCGCGTA 15 0.0031664928 64.0401 43 CGATAAG 100 0.0 64.0401 43 >>END_MODULE