##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841233.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4508040 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.856322703436526 39.0 37.0 39.0 32.0 39.0 2 37.38991202385072 39.0 37.0 39.0 35.0 39.0 3 37.574708742602105 39.0 37.0 39.0 34.0 39.0 4 38.010273644421964 39.0 37.0 40.0 34.0 41.0 5 38.51727180770357 40.0 38.0 41.0 34.0 41.0 6 38.42773466961251 40.0 38.0 41.0 34.0 41.0 7 38.42570540634067 40.0 38.0 41.0 34.0 41.0 8 38.31143534662514 40.0 38.0 41.0 34.0 41.0 9 38.270294850977365 40.0 37.0 41.0 34.0 41.0 10 38.270037532941146 40.0 37.0 41.0 34.0 41.0 11 37.975245561263876 40.0 37.0 41.0 33.0 41.0 12 38.252218037107035 40.0 37.0 41.0 34.0 41.0 13 38.34658476854686 40.0 38.0 41.0 34.0 41.0 14 38.31302495097648 40.0 37.0 41.0 34.0 41.0 15 38.24827264176893 40.0 37.0 41.0 34.0 41.0 16 38.292378062306454 40.0 37.0 41.0 34.0 41.0 17 38.26289163361461 40.0 37.0 41.0 34.0 41.0 18 38.29625491344353 40.0 37.0 41.0 34.0 41.0 19 38.29421478070292 40.0 37.0 41.0 34.0 41.0 20 38.15130988189989 40.0 37.0 41.0 33.0 41.0 21 38.13532821359171 40.0 37.0 41.0 33.0 41.0 22 38.03073752673002 40.0 37.0 41.0 33.0 41.0 23 37.964887844828354 40.0 37.0 41.0 33.0 41.0 24 37.69820986504113 39.0 36.0 41.0 33.0 41.0 25 37.65745765377847 39.0 36.0 41.0 33.0 41.0 26 37.672533001085014 39.0 36.0 41.0 33.0 41.0 27 37.62891842730582 39.0 36.0 41.0 33.0 41.0 28 37.59654067613021 39.0 35.0 41.0 33.0 41.0 29 37.56660565189246 39.0 35.0 41.0 33.0 41.0 30 37.47518580864635 39.0 35.0 41.0 32.0 41.0 31 37.30042741776823 39.0 35.0 41.0 32.0 41.0 32 37.22868147099507 39.0 35.0 41.0 32.0 41.0 33 37.167263249249615 39.0 35.0 41.0 32.0 41.0 34 37.069859007837884 39.0 35.0 41.0 32.0 41.0 35 37.03867395461424 39.0 35.0 41.0 32.0 41.0 36 36.958168121116984 38.0 35.0 41.0 31.0 41.0 37 36.94450215950048 38.0 35.0 40.0 31.0 41.0 38 36.79051806913461 38.0 35.0 40.0 31.0 41.0 39 36.72951406922017 38.0 35.0 40.0 31.0 41.0 40 36.67558078118316 38.0 35.0 40.0 31.0 41.0 41 36.57933045380972 38.0 35.0 40.0 31.0 41.0 42 36.3420182174731 38.0 34.0 40.0 30.0 41.0 43 36.31478146019651 37.0 34.0 40.0 31.0 41.0 44 36.25488175034449 37.0 34.0 40.0 30.0 41.0 45 36.11178165925035 37.0 34.0 40.0 30.0 41.0 46 35.89757661579062 37.0 34.0 40.0 30.0 41.0 47 35.86203984556222 36.0 34.0 40.0 30.0 41.0 48 35.90366682189558 37.0 34.0 40.0 30.0 41.0 49 36.063461014648 37.0 34.0 40.0 30.0 41.0 50 36.338565885973054 38.0 34.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 8.0 14 259.0 15 3274.0 16 3674.0 17 99.0 18 0.0 19 1.0 20 3.0 21 21.0 22 69.0 23 182.0 24 512.0 25 1236.0 26 2732.0 27 6186.0 28 12943.0 29 26817.0 30 50908.0 31 88851.0 32 144665.0 33 222752.0 34 338996.0 35 356911.0 36 473115.0 37 538893.0 38 609910.0 39 783297.0 40 841726.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 41.46862050913479 21.8283999254665 36.70297956539871 2 27.213201302561647 22.34938021845414 28.509773648858484 21.927644830125733 3 27.995625593384265 21.431753045669517 24.52910799371789 26.043513367228332 4 24.911757659648096 22.813040700614902 27.705854428975783 24.569347210761215 5 24.354775024179023 23.491051543464568 25.011668041987207 27.14250539036921 6 24.361230157673845 23.03156138809771 23.725366234549828 28.881842219678617 7 29.367840569293975 21.51442755609977 20.364925777056104 28.752806097550156 8 23.780512151622435 23.31072927480679 27.06961340183317 25.839145171737606 9 26.385347068792647 25.160291390493427 26.683858173396864 21.77050336731706 10 33.03830489525381 20.58262570873373 21.566112989237006 24.81295640677545 11 25.066015385843958 20.19263360573553 27.073561902733783 27.66778910568673 12 27.639306660987923 22.238356358861058 22.992187292038224 27.13014968811279 13 28.363168915981223 21.497191684190913 22.687309784296502 27.45232961553136 14 21.85690455275463 22.79041445949903 21.922831208241274 33.42984977950506 15 23.82507697358497 26.780441167336583 26.913226147061692 22.48125571201675 16 22.845560376571637 28.676764181329357 20.629608432933157 27.848067009165845 17 23.885080877720693 33.05806958234621 19.254487537821316 23.80236200211178 18 23.527386624785937 23.419224319216333 20.772952325179013 32.280436730818714 19 27.901371771324122 22.512577528149706 20.77814305108207 28.807907649444104 20 25.90722353838919 19.92058633020115 23.871194576800562 30.300995554609102 21 24.318861412054908 26.740379411007886 21.590380741963248 27.35037843497396 22 25.86212633428275 23.97452107789638 23.643800853586036 26.519551734234838 23 31.809256350875327 21.71537963283378 25.55267921313919 20.922684803151704 24 26.595527102687644 22.76264185765876 25.112975927454062 25.52885511219954 25 25.223360511059216 27.901318311853007 21.213998003451508 25.661323173636262 26 25.49628504997341 28.060436665576628 24.247878192220448 22.195400092229516 27 24.36615857871286 26.356105550005775 23.132997628318826 26.14473824296254 28 24.058126674647966 21.779054785930107 22.486517302320276 31.676301237101644 29 24.997479724700973 24.126486359627094 25.039756051129324 25.836277864542605 30 23.853380128385716 25.1231053115345 24.061543172784116 26.96197138729567 31 24.805825152192988 29.53383117930567 23.415388717998447 22.244954950502898 32 26.64334954392723 24.408059518119064 23.61705867727382 25.331532260679886 33 25.81597432768396 21.05239346784707 24.923705962162327 28.20792624230664 34 25.19513502512462 25.918441251195556 27.223927772570356 21.662495951109467 35 22.77204941843306 22.760195701967692 22.78277076767511 31.68498411192414 36 21.50934351578072 24.004768408251124 29.117572492627374 25.368315583340777 37 22.33873755141726 29.95500347106289 21.19032488952816 26.51593408799169 38 26.15388260041157 26.470419122783944 22.34826321960113 25.027435057203355 39 25.79261223162247 26.95982757543761 25.242972855474484 22.004587337465438 40 25.754002456487672 25.835751556005537 24.003297063129725 24.406948924377065 41 28.012027684936413 26.4445560931285 22.06374014935894 23.479676072576144 42 22.739477250399375 30.372092821121242 21.948499120212265 24.939930808267118 43 24.88556218898277 22.45989898687284 23.01948464503359 29.6350541791108 44 25.636257971336867 23.434986316948656 22.42529670108185 28.503459010632625 45 23.309316062012066 23.570893178567093 28.112928681900478 25.006862077520363 46 22.10938484768027 27.102773911341043 28.23092416330756 22.556917077671127 47 24.1480014095686 30.343845816907578 24.169408409328184 21.33874436419564 48 26.274730962173326 26.589789933789493 20.963683351468987 26.171795752568194 49 21.449917508866562 28.461769699433077 21.786762184201503 28.30155060749886 50 18.73414659525962 31.35213917076473 26.879806698261987 23.033907535713656 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 8996.0 1 7081.0 2 5021.5 3 5080.5 4 5299.0 5 4433.5 6 3331.5 7 2953.5 8 2863.0 9 2892.0 10 2876.5 11 3780.0 12 4858.5 13 5575.5 14 6998.5 15 9807.5 16 12304.5 17 15098.0 18 18123.0 19 17968.5 20 17150.0 21 23395.5 22 30344.0 23 33039.5 24 35677.0 25 41960.0 26 49713.0 27 54543.0 28 64299.0 29 74735.5 30 82299.5 31 97086.0 32 108585.5 33 105598.0 34 113459.0 35 134941.5 36 135801.5 37 124187.5 38 124731.0 39 136404.5 40 150037.5 41 165956.5 42 180625.0 43 206964.5 44 233863.0 45 224488.0 46 214274.0 47 217649.5 48 227564.5 49 281447.5 50 380078.5 51 412942.5 52 348808.5 53 284328.0 54 258403.0 55 259051.0 56 264884.0 57 250459.5 58 234415.5 59 240790.5 60 241572.5 61 232927.0 62 225466.0 63 218259.5 64 215128.5 65 209271.5 66 234584.5 67 260069.5 68 205205.5 69 150155.0 70 134503.5 71 117945.5 72 98876.0 73 84063.5 74 77951.0 75 70654.5 76 62465.5 77 50827.0 78 42045.5 79 35828.0 80 27765.0 81 19688.5 82 13410.5 83 10938.5 84 8883.0 85 6925.0 86 5177.0 87 3618.5 88 2690.0 89 2280.0 90 1688.0 91 916.5 92 710.0 93 655.5 94 709.0 95 607.5 96 424.0 97 345.0 98 551.5 99 721.5 100 685.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 32316.0 25 32461.0 26 28673.0 27 29340.0 28 30567.0 29 31149.0 30 33586.0 31 34706.0 32 33418.0 33 35492.0 34 35735.0 35 32661.0 36 32732.0 37 32907.0 38 33844.0 39 33088.0 40 34480.0 41 39146.0 42 39767.0 43 41686.0 44 41346.0 45 60270.0 46 85002.0 47 173524.0 48 635900.0 49 1354278.0 50 1479966.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.901897430333722 #Duplication Level Percentage of deduplicated Percentage of total 1 67.8288654142257 6.038056027333476 2 13.510745386111964 2.4054253926904656 3 5.5841153699130235 1.4912766678634732 4 2.903887334453697 1.03400428802208 5 1.7457374333394307 0.7770187785940832 6 1.1853290999257886 0.6331006841237495 7 0.8051631638230315 0.501723592932493 8 0.6048201870674568 0.43072378152558033 9 0.4986509344149999 0.39950455245321576 >10 3.3894855755744318 6.092515715955622 >50 0.5196917696691159 3.285778603374952 >100 0.755950902530955 16.745493585423397 >500 0.5550113797576927 35.89902964332717 >1k 0.10756613551158511 13.732337157064855 >5k 0.002987948208655142 1.714755064063317 >10k+ 0.001991965472436761 8.819256465252097 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 109983 2.4397077222029973 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 90042 1.9973647083876807 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAA 86597 1.9209456881482863 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 52849 1.1723276634635007 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAAC 17606 0.39054666773143093 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAG 16075 0.3565851234682922 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCATAC 14661 0.32521894215668007 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 10072 0.223423039724581 No Hit CTCTCTGCTCCTCCTGTTCGACAGTCAGCCGCATCTTCTTTTGCGTCG 8191 0.1816975891961917 No Hit ATTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCAC 8072 0.17905786106600652 No Hit CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA 7857 0.17428860436020976 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGG 7269 0.16124524183458885 No Hit ACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAAT 7102 0.1575407494165979 No Hit ATTCCTGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCGTGGCCT 6350 0.1408594422409739 No Hit CGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAG 6155 0.13653383732176289 No Hit AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCT 5774 0.12808227078730444 No Hit ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 5213 0.11563783817357433 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGG 5185 0.1150167256723543 No Hit AGTGCGTTACTTACCTCGACTCTTAGCTTGTCGGGGACGGTAACCGGGA 5121 0.11359703995527991 No Hit ATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGCCCATGACC 5073 0.1125322756674741 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0284824446988048 0.0 0.0 0.0 0.0 2 0.059183148330538324 0.0 0.0 0.0 0.0 3 0.07870382694031108 0.0 0.0 0.0 0.0 4 0.10294939707722203 0.0 0.0 0.0 0.0 5 0.13413811767419986 0.0 0.0 0.0 0.0 6 0.18027790347911732 0.0 0.0 0.0 0.0 7 0.2253085598175704 0.0 0.0 0.0 0.0 8 0.2936974827197629 0.0 0.0 0.0 0.0 9 0.3459596631795636 0.0 0.0 0.0 0.0 10 0.39709053158357066 0.0 0.0 0.0 0.0 11 0.4549205419650225 0.0 0.0 0.0 0.0 12 0.5161444885138552 0.0 0.0 0.0 0.0 13 0.581228205605984 0.0 0.0 0.0 0.0 14 0.6436721945679276 0.0 0.0 0.0 0.0 15 0.7154106884588424 0.0 0.0 0.0 0.0 16 0.7803169448363368 0.0 0.0 0.0 0.0 17 0.8577563641848786 0.0 0.0 0.0 0.0 18 0.9235499241355445 0.0 0.0 0.0 0.0 19 0.9997249358923168 0.0 0.0 0.0 0.0 20 1.0772309030088465 0.0 0.0 0.0 0.0 21 1.1490581272570786 0.0 0.0 0.0 0.0 22 1.211502116219022 0.0 0.0 0.0 0.0 23 1.272903523482489 0.0 0.0 0.0 0.0 24 1.3292029352002201 0.0 0.0 0.0 0.0 25 1.3863896504911226 0.0 0.0 0.0 0.0 26 1.450452968474104 0.0 0.0 0.0 0.0 27 1.507373492693055 0.0 0.0 0.0 0.0 28 1.563983460661396 0.0 0.0 0.0 0.0 29 1.629777020612062 0.0 0.0 0.0 0.0 30 1.690623863142297 0.0 0.0 0.0 0.0 31 1.7536667820161311 0.0 0.0 0.0 0.0 32 1.8131826691866089 0.0 0.0 0.0 0.0 33 1.8731643907330016 0.0 0.0 0.0 0.0 34 1.945634910071783 0.0 0.0 0.0 0.0 35 2.0032209119706126 0.0 0.0 0.0 0.0 36 2.06335791164231 0.0 0.0 0.0 0.0 37 2.121897764882299 0.0 0.0 0.0 0.0 38 2.1712762087292927 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGT 40 0.0 124.34556 44 CTATCAT 11135 0.0 106.9249 44 TAAGCCA 6615 0.0 106.86387 44 TTGACGC 145 0.0 102.90667 44 ACTTCTA 1905 0.0 83.549774 44 TACGAGC 130 0.0 81.302864 44 ATTAGTC 565 0.0 79.22903 44 TCGAGTT 160 0.0 69.94438 44 CTTACTG 205 0.0 66.72201 44 CTCCGAA 210 0.0 65.133385 44 TACCGAC 120 0.0 64.74932 43 CCCATAC 2940 0.0 64.2875 44 TACGGCT 175 0.0 63.949142 44 TAATTCC 790 0.0 62.959778 44 TTAAGCC 6145 0.0 60.32382 43 CGAAACA 70 0.0 60.124374 43 GGAGACA 2165 0.0 58.00878 44 AATCGCA 825 0.0 57.27432 44 ACCACTC 1570 0.0 56.62871 44 CCTTAGC 14080 0.0 55.184082 43 >>END_MODULE