##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841228.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2590874 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.25032981148446 38.0 35.0 39.0 31.0 39.0 2 36.967661877806485 39.0 37.0 39.0 33.0 39.0 3 37.024511805668666 39.0 36.0 39.0 33.0 39.0 4 37.46724773184647 39.0 37.0 40.0 33.0 41.0 5 37.98795966148875 39.0 37.0 40.0 33.0 41.0 6 37.745849856071736 39.0 36.0 40.0 33.0 41.0 7 37.77634728666852 39.0 37.0 40.0 33.0 41.0 8 37.49957736269691 39.0 36.0 40.0 33.0 41.0 9 37.48138813388841 39.0 36.0 40.0 33.0 41.0 10 37.47732193846555 39.0 36.0 40.0 33.0 41.0 11 37.07815393569892 39.0 35.0 40.0 31.0 41.0 12 37.59148727417852 39.0 36.0 40.0 33.0 41.0 13 37.74950615120612 39.0 36.0 40.0 33.0 41.0 14 37.760361175418026 39.0 36.0 41.0 33.0 41.0 15 37.656118746029335 39.0 36.0 41.0 33.0 41.0 16 37.78096696327185 39.0 36.0 41.0 33.0 41.0 17 37.768883782075086 39.0 36.0 41.0 33.0 41.0 18 37.70023860674043 39.0 36.0 41.0 33.0 41.0 19 37.70190561177425 39.0 36.0 41.0 33.0 41.0 20 37.574723047126184 39.0 35.0 41.0 33.0 41.0 21 37.50558614583341 39.0 35.0 41.0 33.0 41.0 22 37.40921133177453 39.0 35.0 41.0 32.0 41.0 23 37.33140592711185 39.0 35.0 41.0 32.0 41.0 24 37.07174412958716 39.0 35.0 40.0 31.0 41.0 25 37.082384991168965 39.0 35.0 40.0 31.0 41.0 26 37.066559406669086 39.0 35.0 40.0 31.0 41.0 27 36.96540210123862 38.0 35.0 40.0 31.0 41.0 28 37.00055751800652 39.0 35.0 40.0 31.0 41.0 29 36.93285746484916 38.0 35.0 40.0 31.0 41.0 30 36.848330981112234 38.0 35.0 40.0 31.0 41.0 31 36.67004201834282 38.0 35.0 40.0 31.0 41.0 32 36.630185309461574 38.0 35.0 40.0 31.0 41.0 33 36.48365076277196 38.0 34.0 40.0 31.0 41.0 34 36.469296598404064 38.0 34.0 40.0 31.0 41.0 35 36.472577855996406 38.0 34.0 40.0 31.0 41.0 36 36.41346578831057 38.0 34.0 40.0 31.0 41.0 37 36.2429309075157 37.0 34.0 40.0 31.0 41.0 38 36.09327262712457 37.0 34.0 40.0 30.0 41.0 39 36.07039293236488 37.0 34.0 40.0 31.0 41.0 40 36.07061468217159 37.0 34.0 40.0 31.0 41.0 41 35.893823710124785 36.0 34.0 40.0 30.0 41.0 42 35.69538743780417 36.0 34.0 40.0 30.0 41.0 43 35.67788967224693 36.0 34.0 40.0 30.0 41.0 44 35.673434635925375 36.0 34.0 40.0 30.0 41.0 45 35.373218131833674 36.0 33.0 39.0 30.0 41.0 46 35.25091337042856 35.0 33.0 39.0 29.0 41.0 47 35.18854145393025 35.0 33.0 39.0 29.0 41.0 48 35.23027550777213 35.0 33.0 39.0 29.0 41.0 49 35.583835508837964 36.0 34.0 39.0 29.0 41.0 50 35.885927341041615 37.0 34.0 39.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 61.0 14 437.0 15 3020.0 16 1015.0 17 3.0 18 0.0 19 1.0 20 2.0 21 12.0 22 46.0 23 150.0 24 468.0 25 1144.0 26 2591.0 27 5870.0 28 12115.0 29 23604.0 30 44167.0 31 75506.0 32 116367.0 33 172235.0 34 234584.0 35 238318.0 36 284335.0 37 322987.0 38 362434.0 39 416052.0 40 273350.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 42.332162814556014 21.230557719132616 36.43727946631137 2 26.564201887085208 21.81310245114197 28.544537480402365 23.078158181370455 3 28.441522050088118 21.01256178417013 24.868094704721262 25.67782146102049 4 24.220166631028757 21.19331160064133 28.58074147951618 26.005780288813735 5 22.410468436519874 25.285598604949527 24.634158202984786 27.669774755545813 6 22.912499797365676 24.015023501721814 23.47925835065696 29.59321835025555 7 27.02142211469952 22.365657303288387 21.55504281566761 29.057877766344486 8 24.552564115429774 23.418313665581575 25.84270790474566 26.186414314242995 9 27.335563211487706 27.02088175650379 23.98634592033422 21.657209111674284 10 34.822226013306704 19.769737933994474 22.034417729306792 23.37361832339203 11 26.090963898668946 20.33136308442634 24.990640224109704 28.58703279279502 12 28.137261788878966 22.06031632568778 23.539701274550595 26.26272061088266 13 27.754572395261214 22.730862249572926 22.961942572274836 26.55262278289102 14 22.5599160746528 22.14075250282337 20.528478034825316 34.770853387698516 15 24.995966612039027 25.905389455450166 25.097090788668226 24.001553143842578 16 20.986585993761178 28.636514164718164 21.665468872666136 28.711430968854522 17 22.869464126777295 34.641784972947356 18.756952287143257 23.731798613132092 18 23.52592214055952 23.84102816269722 21.41169350574362 31.22135619099964 19 29.044021438325444 22.231455485677806 21.314853597666268 27.40966947833048 20 24.87812992835622 19.811577097149456 24.66731303799413 30.642979936500193 21 23.77082019426649 26.790882150193333 22.5308525231254 26.907445132414775 22 26.70469501797463 22.024807072825617 25.288570575026032 25.981927334173722 23 32.08249416992104 20.78043934209074 25.41482140775661 21.722245080231612 24 26.88579220757165 21.084468021216008 27.473431745426446 24.556308025785892 25 24.96830208569746 27.0796537345924 20.296630970098267 27.655413209611872 26 25.79203986932593 28.41293791019591 24.42321917337859 21.371803047099565 27 23.793830907862738 25.48098281647066 23.007668008416356 27.717518267250245 28 22.37492287201647 21.006248115481306 23.91476683886092 32.704062173641304 29 24.090267437120403 23.04736467968793 26.770565828675245 26.091802054516418 30 22.73092055678457 25.84053243216406 24.698565714871734 26.729981296179634 31 25.185373229604014 29.263276198410047 23.356718847623636 22.1946317243623 32 26.946935579267304 24.039669945259092 22.578612804511334 26.434781670962266 33 22.944448279396475 21.779445633279572 26.65792297603434 28.618183111289614 34 24.46612962439393 26.27250745852973 27.158416217607616 22.102946699468724 35 22.684191535027328 20.601436189315557 23.80452302617582 32.9098492494813 36 21.824231134164354 22.84521916021265 28.357351822508726 26.97319788311427 37 22.199306909248428 31.014814814814816 21.29772579597141 25.488152479965347 38 26.92348045044415 25.80646289431349 21.534237952017907 25.73581870322445 39 26.346117934892256 27.541730329211696 24.624326604417536 21.487825131478512 40 25.084666812435348 25.83000195496282 24.584793061173414 24.500538171428417 41 26.09577197892709 28.425774895981608 21.306094306709632 24.172358818381667 42 22.068176786757686 28.817172399025914 23.005922893507684 26.108727920708713 43 26.571588195151328 22.97470527064045 21.884654640850222 28.569051893357994 44 24.53080421188773 24.167445281915853 20.25591697405949 31.04583353213693 45 22.385056691231465 23.56301558224932 28.434913898407892 25.617013828111325 46 21.119324684553217 26.86168730749685 29.378165124418885 22.640822883531044 47 23.519732272587916 29.026841466749264 26.217282865065446 21.236143395597374 48 26.225428233614213 26.332186138222795 20.364703613690445 27.077682014472547 49 21.274243426402123 28.02541056262297 22.530694573804855 28.169651437170053 50 20.65944304131018 27.33327765236489 27.472205589820263 24.535073716504662 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2020.0 1 1612.5 2 1190.5 3 1372.5 4 1576.5 5 1561.0 6 1607.5 7 1686.5 8 1805.5 9 2175.0 10 2503.5 11 2480.5 12 2404.0 13 3835.5 14 5849.0 15 7018.0 16 7167.5 17 6485.0 18 6666.0 19 7802.0 20 8555.0 21 11428.0 22 15187.0 23 19484.0 24 24019.5 25 26833.5 26 28986.0 27 28158.5 28 29512.0 29 37593.0 30 44082.5 31 52204.5 32 59979.0 33 54284.0 34 58309.0 35 76305.5 36 79380.5 37 75219.0 38 75079.5 39 81662.5 40 89999.0 41 95349.5 42 110434.5 43 131855.0 44 139235.5 45 132818.0 46 131426.5 47 131542.0 48 142100.0 49 179554.0 50 235396.5 51 238803.0 52 182515.5 53 150305.0 54 147237.0 55 149652.5 56 150645.0 57 150734.5 58 149535.0 59 138802.5 60 132883.0 61 137463.5 62 137437.5 63 130102.5 64 119952.5 65 113764.5 66 134505.5 67 152421.0 68 122102.5 69 93980.0 70 85114.0 71 75855.5 72 65593.0 73 52609.0 74 41963.0 75 33520.5 76 28803.5 77 25735.0 78 24005.5 79 20575.0 80 15652.0 81 11913.5 82 9075.5 83 6526.5 84 4482.0 85 3556.5 86 3048.5 87 2191.5 88 1364.5 89 1167.0 90 950.0 91 794.0 92 870.0 93 833.0 94 729.0 95 436.5 96 163.5 97 55.0 98 498.0 99 940.5 100 940.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 22093.0 25 20456.0 26 22767.0 27 21603.0 28 23858.0 29 22845.0 30 22839.0 31 23419.0 32 20699.0 33 20525.0 34 19662.0 35 21971.0 36 19637.0 37 20980.0 38 22321.0 39 19632.0 40 20720.0 41 20519.0 42 22411.0 43 23170.0 44 22085.0 45 37021.0 46 48002.0 47 117356.0 48 378552.0 49 705650.0 50 850081.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.73765557453302 #Duplication Level Percentage of deduplicated Percentage of total 1 66.67461681571078 5.159052204839376 2 13.289746113251317 2.056629561946552 3 5.546508243710161 1.2875091129341183 4 2.9470583472218257 0.9121328979542009 5 1.8109475709703564 0.7006244283852904 6 1.1894089354706419 0.5521942007966278 7 0.8775762158279748 0.4753267748935246 8 0.6592095975359442 0.40805894537277343 9 0.5192201295710561 0.3615791876986715 >10 4.078752447923455 6.4636573852349875 >50 0.6447113484113757 3.5407941549882436 >100 0.9795228059996954 18.794629131598004 >500 0.6721140718685601 37.76354925436142 >1k 0.10462858049844154 11.4581002499934 >5k 0.001992925342827458 0.9477482253507138 >10k+ 0.003985850685654916 9.118414283652088 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 65046 2.5105813713827843 No Hit ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT 60299 2.3273613460168265 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAA 46154 1.7814065832610926 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 18630 0.7190623704587719 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAAC 13277 0.5124525546205644 No Hit CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAG 12993 0.501491002650071 No Hit TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA 10103 0.3899456322461069 No Hit AATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACCCCCATAC 10024 0.3868964681416387 No Hit ATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGCCCATGACC 6783 0.2618035458304804 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGG 6538 0.25234727740523083 No Hit AGTCCGAGTGGAGAGAGCGAGCTGAGTGGTTGTGTGGTCGCGTCTCGGA 5752 0.22201002441647105 No Hit ATTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCAC 5511 0.21270814404714394 No Hit ACATACCCATGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCA 4761 0.1837603835616861 No Hit CGCAATAGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAG 4719 0.1821393089745005 No Hit CTTTTACCTCGTTGCACTGCTGAGAGCAAGATGGGTCACCAGCAGCTGT 4657 0.17974629410770265 No Hit AGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGG 4046 0.1561635185655497 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCC 3867 0.14925465306302044 No Hit ATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTAACCACTC 3792 0.14635987701447467 No Hit CTCTCTGCTCCTCCTGTTCGACAGTCAGCCGCATCTTCTTTTGCGTCG 3744 0.14450722034340535 No Hit ACGGTTCGTTTTTCCTTTAGTCAGGAAGGACGTTGGTGTTGAGGTTAGC 3378 0.13038071322650194 No Hit CTCTTTCCGGTGTGGAGTCTGGAGACGACGTGCAGAAATGGCACCTCGA 3240 0.1250543252971777 No Hit CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCCA 3009 0.11613841506765671 No Hit CTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAAGACATTGG 2831 0.10926814657910805 No Hit TGGAGAAGGGTTCCATGTGAACAGCAGTTGAACATGGGTCAGTCGGTCC 2790 0.10768566900590303 No Hit AATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCCGGAAGATGC 2738 0.1056786242789113 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.01887393983651849 0.0 0.0 0.0 0.0 2 0.03242149174371274 0.0 0.0 0.0 0.0 3 0.04357602878410915 0.0 0.0 0.0 0.0 4 0.05913062541829514 0.0 0.0 0.0 0.0 5 0.07653787872355043 0.0 0.0 0.0 0.0 6 0.1016259378109472 0.0 0.0 0.0 0.0 7 0.12628942974455723 0.0 0.0 0.0 0.0 8 0.16129692142497087 0.0 0.0 0.0 0.0 9 0.1895499356587777 0.0 0.0 0.0 0.0 10 0.21212918883743478 0.0 0.0 0.0 0.0 11 0.236676889729103 0.0 0.0 0.0 0.0 12 0.2670527397318434 0.0 0.0 0.0 0.0 13 0.29549873903555324 0.0 0.0 0.0 0.0 14 0.3250640517447008 0.0 0.0 0.0 0.0 15 0.35852766286589005 0.0 0.0 0.0 0.0 16 0.388054378561057 0.0 0.0 0.0 0.0 17 0.42672858656962864 0.0 0.0 0.0 0.0 18 0.46135010811023613 0.0 0.0 0.0 0.0 19 0.49774709229395175 0.0 0.0 0.0 0.0 20 0.5306703452194125 0.0 0.0 0.0 0.0 21 0.56340061307497 0.0 0.0 0.0 0.0 22 0.594316821273439 0.0 0.0 0.0 0.0 23 0.6249628503740436 0.0 0.0 0.0 0.0 24 0.6550299242649391 0.0 0.0 0.0 0.0 25 0.686949654826904 0.0 0.0 0.0 0.0 26 0.719834310738384 0.0 0.0 0.0 0.0 27 0.7517540413003488 0.0 0.0 0.0 0.0 28 0.7847544882537707 0.0 0.0 0.0 0.0 29 0.8224637709128271 0.0 0.0 0.0 0.0 30 0.8642643370538282 0.0 0.0 0.0 0.0 31 0.9002753510977377 0.0 0.0 0.0 0.0 32 0.935514424862035 0.0 0.0 0.0 0.0 33 0.9723359761995373 0.0 0.0 0.0 0.0 34 1.018536601934328 0.0 0.0 0.0 0.0 35 1.0536598846566834 0.0 0.0 0.0 0.0 36 1.0949586896159365 0.0 0.0 0.0 0.0 37 1.1342890468621785 0.0 0.0 0.0 0.0 38 1.1653982401305505 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCATACG 80 0.0 123.05245 44 ATAAGCG 60 0.0 123.05245 44 CAATAAC 25 9.8825694E-8 123.05245 44 TAGCTCG 65 0.0 113.58688 44 AACGCGT 65 0.0 104.121315 44 ATGCGGC 65 0.0 104.121315 44 CTATCAT 8070 0.0 99.79905 44 AATCGCA 515 0.0 99.158775 44 CTAAATT 310 0.0 95.26642 44 CTCTATT 85 0.0 94.09894 44 GTTCGTG 165 0.0 89.49269 44 TAAGCCA 2800 0.0 87.01566 44 ACCACTC 870 0.0 85.57096 44 ACTTCTA 1485 0.0 80.37769 44 CCCTTGT 345 0.0 80.2516 44 ACTATAG 185 0.0 79.81781 44 AGTATTG 110 0.0 78.30611 44 CCTCGAA 135 0.0 77.47747 44 TAATTCC 420 0.0 76.17533 44 CGACGGG 325 0.0 75.72459 44 >>END_MODULE