##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841223.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7361993 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.225358269153475 37.0 34.0 39.0 30.0 39.0 2 36.02154566025803 37.0 35.0 39.0 32.0 39.0 3 36.23934157503274 37.0 35.0 39.0 32.0 39.0 4 36.81096559043183 38.0 35.0 39.0 33.0 41.0 5 37.312157319356324 38.0 35.0 40.0 33.0 41.0 6 37.358637531983526 38.0 35.0 40.0 33.0 41.0 7 37.30285902200668 38.0 35.0 40.0 33.0 41.0 8 37.21259270417671 38.0 35.0 40.0 33.0 41.0 9 37.17153086127629 38.0 35.0 40.0 33.0 41.0 10 37.04847478121753 38.0 35.0 40.0 32.0 41.0 11 36.95289060992044 38.0 35.0 40.0 32.0 41.0 12 36.867756733808356 38.0 35.0 40.0 32.0 41.0 13 36.76301104877443 38.0 35.0 40.0 31.0 41.0 14 36.71443534379889 38.0 35.0 40.0 31.0 41.0 15 36.682123712967396 38.0 35.0 40.0 31.0 41.0 16 36.621834467921936 38.0 35.0 40.0 31.0 41.0 17 36.59085046671465 38.0 35.0 40.0 31.0 41.0 18 36.526312100541254 38.0 35.0 40.0 31.0 41.0 19 36.41756681920236 38.0 35.0 40.0 31.0 41.0 20 36.33095793489616 38.0 34.0 40.0 31.0 41.0 21 36.12444890941896 38.0 34.0 40.0 30.0 41.0 22 36.12744972726814 37.0 34.0 40.0 30.0 41.0 23 36.15693318371805 37.0 34.0 40.0 31.0 41.0 24 36.121151704436556 37.0 34.0 40.0 30.0 41.0 25 36.103123522716125 37.0 34.0 40.0 31.0 41.0 26 36.08711930925999 37.0 34.0 40.0 31.0 41.0 27 36.08200463066613 37.0 34.0 40.0 31.0 41.0 28 36.08919599461594 37.0 34.0 40.0 31.0 41.0 29 36.13936959010929 37.0 34.0 40.0 31.0 41.0 30 36.14235305560449 37.0 34.0 40.0 31.0 41.0 31 36.086386722411 37.0 34.0 40.0 31.0 41.0 32 36.05021784557632 37.0 34.0 40.0 31.0 41.0 33 35.966085372251975 37.0 34.0 40.0 31.0 41.0 34 35.94008249399335 36.0 34.0 40.0 31.0 41.0 35 35.848366503094915 36.0 34.0 40.0 31.0 41.0 36 35.63375923246783 36.0 34.0 39.0 30.0 41.0 37 35.64204100057555 36.0 34.0 39.0 30.0 41.0 38 35.573328304554124 35.0 34.0 39.0 30.0 41.0 39 35.37544190545962 35.0 34.0 39.0 30.0 41.0 40 35.32044698838928 35.0 33.0 39.0 30.0 41.0 41 35.19342028295465 35.0 33.0 39.0 30.0 40.0 42 35.08295358759646 35.0 33.0 39.0 30.0 40.0 43 34.95986727310548 35.0 33.0 38.0 30.0 40.0 44 34.87045285423616 35.0 33.0 38.0 30.0 40.0 45 34.855639294744776 35.0 33.0 38.0 30.0 40.0 46 34.784895042495926 35.0 33.0 38.0 30.0 40.0 47 34.76983866558299 35.0 33.0 38.0 30.0 40.0 48 34.818604147224065 35.0 33.0 38.0 30.0 40.0 49 34.8103632211081 35.0 33.0 38.0 29.0 40.0 50 35.510759451522276 36.0 34.0 39.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 12.0 21 73.0 22 287.0 23 897.0 24 2559.0 25 6317.0 26 13785.0 27 28481.0 28 55991.0 29 104819.0 30 182438.0 31 296054.0 32 450674.0 33 664993.0 34 978913.0 35 678560.0 36 807317.0 37 918807.0 38 933851.0 39 844424.0 40 392739.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 49.02653398339281 17.621736396652373 33.35172961995481 2 27.257999294484524 21.559678201269683 29.54614327940817 21.636179224837623 3 32.17566221538108 16.125416038836224 24.881509667287105 26.81741207849559 4 20.515164847345005 18.08515710351803 28.110390759676086 33.28928728946089 5 25.874746145507068 20.058956861273845 27.025358486485928 27.040938506733163 6 27.0423375844014 19.341542432871098 24.342470849945116 29.27364913278239 7 29.510758839352334 21.669118674793634 22.427459520811823 26.392662965042213 8 28.468282977177513 17.123012749400875 28.08830434910764 26.320399924313975 9 26.90175065366131 18.344380387213082 23.368563376792125 31.38530558233348 10 27.48968927299985 22.060181257982723 24.997279948513942 25.452849520503484 11 32.921533611890155 18.30649662394409 24.121158496075722 24.650811268090038 12 28.35009487240751 17.233431218964757 22.763075161848157 31.653398746779576 13 25.99084242541388 18.785972765798608 27.370428089241592 27.85275671954592 14 27.277776547736458 19.76875011970264 21.36157967007032 31.591893662490577 15 24.88119725188546 20.633135619661687 22.439942553599277 32.04572457485357 16 26.397865360643515 20.638664013942964 27.928619329032234 25.034851296381294 17 27.656627763704744 20.070366815073037 19.406579169526513 32.8664262516957 18 26.71070184391645 19.40479976006497 20.441801561071845 33.44269683494673 19 26.298653095703838 18.63997969028224 28.345435807939506 26.715931406074418 20 28.25876090890062 17.763654488669033 25.7513692284141 28.22621537401625 21 28.447174562649003 21.13833849067773 21.008360100315226 29.406126846358045 22 28.10699494009299 19.41868187052066 27.089960558234704 25.384362631151646 23 27.733807951189306 20.506430799377288 23.752290989681736 28.00747025975167 24 31.511045989856278 22.698812672057688 20.85924287078241 24.93089846730362 25 27.911346157672547 20.94119406733087 23.266384857793096 27.88107491720349 26 31.016509009839016 21.400754059505143 22.11598008201166 25.466756848644177 27 28.824463297069524 22.066912664104144 24.549774207130923 24.558849831695408 28 29.193648935135712 20.01328654579871 25.415451544261035 25.377612974804535 29 30.85191422275314 19.497082052598362 26.227103192110455 23.423900532538035 30 27.402975756348113 20.803166726249124 23.851899628331715 27.941957889071045 31 26.658735334447176 20.337623862484435 29.7201301035921 23.283510699476288 32 28.28058773355085 19.32455811444622 25.12418403839871 27.270670113604222 33 25.60934113514567 19.346231057105385 25.80787335308165 29.236554454667296 34 24.71234077637985 18.95604022868116 32.16998861663403 24.16163037830496 35 30.59761274068119 19.805445215507476 23.072619684764945 26.524322359046394 36 26.24733115053682 20.932307926597122 22.212091677453742 30.608269245412323 37 24.382522285493387 21.234666575708605 26.653877225668488 27.728933913129524 38 32.08673496063263 21.106925116130203 21.539454946322024 25.266884976915144 39 26.272733236469602 21.04220163789475 26.10308046124211 26.581984664393538 40 26.8174131880413 20.543244044300472 21.96477805447308 30.67456471318515 41 26.178408380521645 21.620875239129678 22.985495733240185 29.21522064710849 42 25.341803708175625 21.533308165211363 28.494241164850116 24.6306469617629 43 23.79158099680001 26.150695891505606 23.407727248901992 26.64999586279239 44 22.962977559687864 25.341374100056246 23.89446694071894 27.80118139953695 45 24.737282798245612 19.979810969880806 29.497327340039426 25.785578891834156 46 24.486374959607176 22.169565144630027 22.67066905696712 30.673390838795672 47 25.510470589236306 21.707638108675717 24.140509769553443 28.64138153253453 48 23.49976203580364 21.487679481282367 25.88667143481332 29.125887048100672 49 28.305715273117034 21.31447900910557 21.849769355598074 28.530036362179327 50 24.083168858806577 24.80210000490313 24.316616574202342 26.798114562087942 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 19727.0 1 19442.0 2 12001.0 3 4784.0 4 4605.5 5 3720.5 6 2474.5 7 2198.0 8 2490.0 9 2635.0 10 2737.0 11 2809.0 12 2799.0 13 2773.0 14 2853.0 15 3177.5 16 3598.5 17 4210.5 18 4905.0 19 5779.5 20 7000.0 21 8944.5 22 11177.5 23 13938.5 24 16793.5 25 19587.0 26 23581.5 27 28909.0 28 34358.0 29 39679.5 30 46289.5 31 55981.5 32 67179.0 33 76515.5 34 89966.0 35 108851.0 36 122615.0 37 133629.5 38 147721.5 39 167677.5 40 193606.5 41 231544.0 42 283082.0 43 329198.0 44 350178.5 45 348947.0 46 357393.5 47 380066.0 48 421250.0 49 474499.5 50 539497.5 51 605526.0 52 654825.0 53 667927.0 54 635106.5 55 618715.0 56 644168.0 57 682997.0 58 707015.5 59 650170.5 60 548467.0 61 493715.5 62 467179.0 63 442705.0 64 424857.0 65 410920.0 66 366975.5 67 318850.0 68 285288.5 69 252593.5 70 222412.5 71 194797.5 72 172548.5 73 152491.5 74 131893.5 75 112928.0 76 98472.5 77 80281.5 78 63984.5 79 51809.0 80 39717.5 81 29662.5 82 22211.5 83 16516.0 84 12287.5 85 9408.0 86 7033.0 87 4968.5 88 3390.0 89 2388.5 90 1638.0 91 1008.5 92 692.0 93 576.5 94 393.0 95 183.5 96 118.0 97 109.0 98 61.5 99 13.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 74548.0 25 69447.0 26 66975.0 27 65660.0 28 61076.0 29 53555.0 30 67310.0 31 62567.0 32 72684.0 33 61016.0 34 64810.0 35 75845.0 36 58006.0 37 62927.0 38 73729.0 39 76104.0 40 74737.0 41 75657.0 42 78446.0 43 78742.0 44 79993.0 45 111956.0 46 389917.0 47 893002.0 48 1318756.0 49 1828055.0 50 1366473.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.809557896701165 #Duplication Level Percentage of deduplicated Percentage of total 1 55.64152212082693 11.022339539130995 2 12.961113379053382 5.13507851776132 3 7.1933885666673625 4.27493541854596 4 4.886566431343407 3.872028825510945 5 3.5681926593346263 3.5342159535836695 6 2.7049045101219726 3.2149777498985586 7 2.0916401512597105 2.9004126672810817 8 1.6870591590162534 2.673591686855396 9 1.3483857027111021 2.4039832180445697 >10 7.2306406372577845 24.470852942166257 >50 0.38445262203123537 5.243211107827398 >100 0.24787983877095576 9.724782787560605 >500 0.02860544269291132 3.8445828386075562 >1k 0.02187907365432426 8.417998492317205 >5k 0.002365305259920487 3.2281640365607474 >10k+ 0.0014043999980777892 6.038844218347673 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 66233 0.8996612737882257 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG 56786 0.7713400433822742 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 29839 0.40531144215975207 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATC 27211 0.3696145867022693 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT 26764 0.36354286128769747 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCC 26467 0.35950862762298197 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTG 16902 0.22958457037381047 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 15889 0.2158247094231141 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 15566 0.21143731052175682 Illumina Single End Adapter 1 (100% over 32bp) CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 15041 0.20430608939725967 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCTG 14826 0.20138568455579897 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTG 14692 0.19956552525926063 No Hit CTGCGCGTCTGCTCCTCCTTCTCGCGCTTCTGCTGCCGCCCTAATCCT 14209 0.19300480182472327 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 12599 0.17113572370959876 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAA 12440 0.16897598245475104 No Hit TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTA 12285 0.16687057431323285 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTGT 12191 0.16559374614998956 No Hit CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 11292 0.153382378929184 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 11190 0.1519968845392817 No Hit CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC 9301 0.1263380717694244 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 9260 0.125781157357797 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 9012 0.12241250433136788 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 8874 0.12053801192150006 Illumina Single End Adapter 1 (100% over 31bp) ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 8764 0.11904385130493875 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGG 8460 0.11491453469189661 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 8224 0.11170888100545599 Illumina Single End Adapter 1 (100% over 32bp) ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC 8101 0.11003813777057381 No Hit AAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTTCT 8072 0.10964422269893492 No Hit TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA 7914 0.1074980647224196 No Hit ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC 7879 0.10702264998078645 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.2310651477120394 0.0 0.0 0.0 0.0 2 0.5341488371423336 0.0 0.0 0.0 0.0 3 0.6820299883469055 0.0 0.0 0.0 0.0 4 0.7943229503206537 0.0 0.0 0.0 0.0 5 0.9930327290449746 0.0 0.0 0.0 0.0 6 1.1014408734156633 0.0 0.0 0.0 0.0 7 1.1947444122807507 0.0 0.0 0.0 0.0 8 1.265160127155785 0.0 0.0 0.0 0.0 9 1.3267467111147755 0.0 0.0 0.0 0.0 10 1.3808896585476242 0.0 0.0 0.0 0.0 11 1.440099168798449 0.0 0.0 0.0 0.0 12 1.4824110808037987 0.0 0.0 0.0 0.0 13 1.5164779428613964 0.0 0.0 0.0 0.0 14 1.5587083551967518 0.0 0.0 0.0 0.0 15 1.6139651314528551 0.0 0.0 0.0 0.0 16 1.645030088998998 0.0 0.0 0.0 0.0 17 1.6809578601881312 0.0 0.0 0.0 0.0 18 1.7142912252157805 0.0 0.0 0.0 0.0 19 1.8248319442846523 0.0 0.0 0.0 0.0 20 1.8520120842277357 0.0 0.0 0.0 0.0 21 1.912620672146795 0.0 0.0 0.0 0.0 22 1.9299257687422413 0.0 0.0 0.0 0.0 23 1.9486027764492577 0.0 0.0 0.0 0.0 24 1.9646310448814608 0.0 0.0 0.0 0.0 25 1.988157282953135 0.0 0.0 0.0 0.0 26 2.084204644041362 0.0 0.0 0.0 0.0 27 2.098847418083663 0.0 0.0 0.0 0.0 28 2.113544525239293 0.0 0.0 0.0 0.0 29 2.1268289714483566 0.0 0.0 0.0 0.0 30 2.139936835039099 0.0 0.0 0.0 0.0 31 2.152786616341526 0.0 0.0 0.0 0.0 32 2.165296815685644 0.0 0.0 0.0 0.0 33 2.177671182246438 0.0 0.0 0.0 0.0 34 2.1880080570573757 0.0 0.0 0.0 0.0 35 2.19929576135158 0.0 0.0 0.0 0.0 36 2.21044763286246 0.0 0.0 0.0 0.0 37 2.220431342436756 0.0 0.0 0.0 0.0 38 2.227481063891259 0.0 0.0 2.716655666475097E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 725 0.0 174.22554 44 TAAGCCA 2295 0.0 95.61785 44 ATGTTCT 2095 0.0 95.03787 44 TCCTTGT 3265 0.0 82.29214 44 CTATGCG 280 0.0 80.28401 44 AATCCCG 7660 0.0 72.83988 43 ACGACAC 415 0.0 69.64396 44 CACATGC 2550 0.0 66.74592 44 ATCCTTG 4515 0.0 64.4225 43 TCGTGCG 3265 0.0 63.873375 43 AATCGCA 290 0.0 62.750725 44 TTAAGCC 1580 0.0 61.07501 43 AATCCTG 3735 0.0 60.978527 43 AACGACA 730 0.0 58.89022 43 TTCAGGA 3075 0.0 56.742737 44 TAATCCC 15935 0.0 54.7862 42 CGTGCGC 2245 0.0 51.97302 44 TAATCCT 6050 0.0 51.86469 42 GACCTTA 980 0.0 51.800636 43 TTTGGAC 3015 0.0 50.663754 43 >>END_MODULE