##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR841221.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 16352145 Sequences flagged as poor quality 0 Sequence length 24-50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.20195619596083 38.0 35.0 39.0 31.0 39.0 2 36.907701099763976 38.0 35.0 39.0 33.0 39.0 3 37.08301039404922 39.0 37.0 39.0 33.0 39.0 4 37.53358363688678 39.0 37.0 40.0 33.0 41.0 5 38.11929737658271 40.0 37.0 41.0 33.0 41.0 6 38.10409845313872 40.0 37.0 41.0 33.0 41.0 7 37.85276708346214 39.0 37.0 41.0 33.0 41.0 8 37.90091061447902 39.0 37.0 40.0 33.0 41.0 9 37.89377460877457 39.0 37.0 40.0 33.0 41.0 10 37.51942665625825 39.0 36.0 40.0 32.0 41.0 11 37.60562152549406 39.0 36.0 40.0 32.0 41.0 12 37.552875173257085 39.0 36.0 40.0 32.0 41.0 13 37.49559565427043 39.0 36.0 40.0 32.0 41.0 14 37.412397884191954 39.0 36.0 40.0 32.0 41.0 15 37.23217253760898 39.0 36.0 40.0 32.0 41.0 16 37.13302242610985 38.0 35.0 40.0 32.0 41.0 17 36.93344866988398 38.0 35.0 40.0 31.0 41.0 18 36.91488939218677 38.0 35.0 40.0 31.0 41.0 19 36.858519111712866 38.0 35.0 40.0 31.0 41.0 20 36.688955363348356 38.0 35.0 40.0 31.0 41.0 21 36.503593626401916 38.0 35.0 40.0 30.0 41.0 22 36.32571359904159 38.0 35.0 40.0 30.0 41.0 23 36.238582216583815 38.0 34.0 40.0 30.0 41.0 24 36.29745828452475 38.0 34.0 40.0 30.0 41.0 25 36.30917203853098 38.0 35.0 40.0 30.0 41.0 26 36.37222047456139 38.0 35.0 40.0 30.0 41.0 27 36.410688308209515 38.0 35.0 40.0 30.0 41.0 28 36.28128849695604 38.0 34.0 40.0 30.0 41.0 29 36.368237382117854 38.0 35.0 40.0 30.0 41.0 30 36.48703536215144 38.0 35.0 40.0 31.0 41.0 31 36.4570108332807 38.0 35.0 40.0 31.0 41.0 32 36.37932374586976 38.0 34.0 40.0 30.0 41.0 33 36.21979720711342 38.0 34.0 40.0 30.0 41.0 34 36.25509012793691 38.0 34.0 40.0 30.0 41.0 35 36.13403319986477 37.0 34.0 40.0 30.0 41.0 36 36.02071149168801 37.0 34.0 40.0 30.0 41.0 37 35.91139604723315 37.0 34.0 40.0 30.0 41.0 38 35.86387716295772 37.0 34.0 40.0 30.0 41.0 39 35.659151298441394 36.0 34.0 40.0 30.0 41.0 40 35.52583094563157 36.0 34.0 39.0 29.0 41.0 41 35.3962883763432 36.0 33.0 39.0 29.0 41.0 42 35.258866940106 36.0 33.0 39.0 29.0 41.0 43 35.13426785146024 35.0 33.0 39.0 29.0 40.0 44 35.06666959502902 35.0 33.0 39.0 29.0 40.0 45 35.028079713724935 35.0 33.0 39.0 29.0 40.0 46 34.94952962919226 35.0 33.0 39.0 29.0 40.0 47 34.90274498466395 35.0 33.0 39.0 29.0 40.0 48 34.90759503876646 35.0 33.0 38.0 29.0 40.0 49 34.906923646774054 35.0 33.0 38.0 29.0 40.0 50 35.22734314158573 36.0 33.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 4.0 19 21.0 20 92.0 21 328.0 22 712.0 23 1589.0 24 3691.0 25 7997.0 26 17197.0 27 36920.0 28 78163.0 29 160290.0 30 304104.0 31 517627.0 32 801035.0 33 1150792.0 34 1555423.0 35 1784787.0 36 2192197.0 37 2428964.0 38 2344506.0 39 2016580.0 40 949126.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 53.98137063975399 17.09041229759154 28.928217062654472 2 24.192679309044777 30.81993830167235 26.761180261060552 18.226202128222322 3 30.102222063221674 19.801536740286977 23.21021492898944 26.88602626750191 4 21.741166067204027 21.732329306032938 27.22983437341095 29.29667025335208 5 23.019322541476974 27.287074570339243 24.260211733689985 25.4333911544938 6 29.023391120859067 23.80355604723417 23.357987591230387 23.815065240676375 7 28.713541862550755 21.8810865485843 25.450838406826747 23.954533182038197 8 32.92577823887937 19.72679425237484 22.1101512981936 25.237276210552196 9 31.346719344770978 23.58673433974564 21.09419895677295 23.972347358710433 10 28.08076860864431 20.365419949492864 26.952971613204262 24.600839828658565 11 28.120579899456615 25.989299874725912 20.898768938264674 24.991351287552796 12 27.42108145445139 20.480163305792605 26.952714766166764 25.14604047358924 13 26.061767431734488 21.35061180047021 19.628739838106863 32.958880929688426 14 28.698864888979397 26.44140569937461 19.047042452228744 25.812686959417253 15 23.846663541694376 27.105612138346373 22.87880275034254 26.16892156961671 16 26.37886344574366 24.627515228124505 19.886724341057395 29.10689698507444 17 30.993554668210194 20.49144011381993 21.575891113979235 26.93911410399064 18 28.799004656575633 21.175778468207078 19.335958676980912 30.68925819823638 19 25.909995294195348 24.31518311512037 21.674826146661495 28.099995444022785 20 31.494412506738414 19.63932560529521 21.56864435827838 27.297617529688 21 31.55121850986522 25.89339196784275 19.67546153730902 22.87992798498301 22 30.916286517762654 20.921989133535693 23.91768174756278 24.244042601138872 23 27.41958318006598 22.660929193081397 23.26581008179661 26.653677545056016 24 33.05937539081265 21.371820027280826 22.937131489477373 22.631673092429157 25 28.45457465354298 22.352979526955767 22.978262231417933 26.214183588083323 26 27.110920436787918 25.30506295273617 21.078065409559247 26.505951200916666 27 30.67415702962682 21.834824340593613 24.31065250710925 23.180366122670314 28 31.607237055420985 21.58184261797721 22.754677898622386 24.05624242797942 29 29.00200014206915 20.85098888375418 23.69040312254156 26.456607851635113 30 28.158734474681975 20.82680024869521 26.237074815359325 24.777390461263494 31 27.5558142552224 19.97027770086357 28.42398652837545 24.049921515538582 32 30.103227556622 19.484688838241045 24.862024104389832 25.550059500747125 33 25.781554027300096 22.22728874099127 26.923384668570886 25.06777256313775 34 26.522974521322556 21.309624038405342 28.758643061433354 23.40875837883875 35 28.12361284430194 21.844078719186307 24.773591014671716 25.25871742184004 36 27.500236163383835 23.71001034669971 22.98928567138544 25.80046781853102 37 25.127953860534625 24.7672802677258 26.983708526566573 23.121057345173003 38 27.796249690270635 24.295037629395814 22.7256199343538 25.183092745979746 39 27.304876001830014 24.410001242929575 23.72887894752644 24.556243807713972 40 27.267299955709163 23.760086967628293 22.776577837171132 26.19603523949141 41 25.976217838258858 24.472277654087435 23.594515779868516 25.95698872778519 42 26.20287030237418 24.597471615352813 24.285116834849006 24.914541247423998 43 24.689576807212514 25.048964639665254 24.15556524280188 26.105893310320354 44 23.69663544084988 24.099543649178745 25.319266858646657 26.884554051324717 45 25.833535121665406 22.218735390107565 25.57523727365563 26.37249221457139 46 25.66803860962816 22.029465280411582 23.82995042352215 28.47254568643811 47 26.223289749964874 22.044221034484718 25.490766731438047 26.241722484112362 48 25.674820375900737 22.443073630138976 25.00889320234051 26.873212791619782 49 27.398932567730334 21.481443104302492 22.978093346803725 28.14153098116345 50 23.396369189264448 24.06624803251175 26.056826557309826 26.480556220913975 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 434323.0 1 427897.0 2 262737.5 3 103558.5 4 101305.0 5 76223.0 6 34894.5 7 17050.5 8 16089.0 9 13346.0 10 10545.5 11 9162.0 12 8841.0 13 8827.0 14 9401.5 15 10356.5 16 11334.0 17 12494.5 18 13909.0 19 15896.5 20 18340.5 21 21694.0 22 25979.0 23 31488.5 24 37093.0 25 42615.0 26 49531.5 27 58492.5 28 68010.0 29 75710.5 30 83586.0 31 96568.5 32 114578.5 33 130279.0 34 148903.0 35 175678.0 36 207579.5 37 241894.5 38 283088.5 39 342105.5 40 424582.0 41 558677.5 42 735266.5 43 872994.5 44 908604.5 45 878465.5 46 879969.5 47 944176.0 48 1109546.5 49 1311089.5 50 1549497.5 51 1805709.0 52 2023428.0 53 2060988.5 54 1837381.0 55 1519855.0 56 1250205.0 57 1127426.5 58 1067877.5 59 1002498.0 60 957500.5 61 931109.0 62 883064.5 63 820308.5 64 759572.5 65 709195.0 66 663341.0 67 622488.5 68 563897.0 69 492844.5 70 437346.5 71 391168.5 72 352312.5 73 317724.5 74 278058.0 75 238743.0 76 209229.5 77 171384.5 78 137756.0 79 115639.5 80 91832.0 81 66751.5 82 47648.5 83 34927.5 84 25893.0 85 19698.5 86 14466.5 87 10271.0 88 7384.0 89 5357.0 90 3633.0 91 2236.0 92 1553.5 93 1281.0 94 869.0 95 445.5 96 313.0 97 291.0 98 153.5 99 15.5 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 24 277496.0 25 240786.0 26 236577.0 27 287634.0 28 274720.0 29 213577.0 30 223561.0 31 213941.0 32 273792.0 33 182415.0 34 223795.0 35 217425.0 36 210156.0 37 188231.0 38 231317.0 39 267210.0 40 254048.0 41 246006.0 42 245707.0 43 233166.0 44 224892.0 45 266912.0 46 735080.0 47 1776003.0 48 2469791.0 49 3645516.0 50 2492391.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.020695408952193 #Duplication Level Percentage of deduplicated Percentage of total 1 57.65915371953886 9.813988929982239 2 12.9315694966336 4.4020861112379555 3 6.964370900026395 3.5561530741295857 4 4.58724751109283 3.123125706071404 5 3.207878144336961 2.73001584018971 6 2.423933446984222 2.4754219735614007 7 1.8405363525953602 2.1929046052640624 8 1.444464838716898 1.966863683899326 9 1.1726843333827024 1.7963912564421411 >10 6.943378460049203 20.91784510493685 >50 0.4412219635207732 5.204425043283745 >100 0.3119761232997743 10.4886707959493 >500 0.035529821074174635 4.220149831991849 >1k 0.028851463234320144 10.111927915692547 >5k 0.003846855510223827 4.418523578530163 >10k+ 0.0033565700040188292 12.58150654883782 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 118232 0.7230366413702911 Illumina Single End Adapter 1 (100% over 32bp) ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 68285 0.4175904751333846 Illumina Single End Adapter 1 (100% over 32bp) AAGCAGTGGTATCAACGCAGAGTGCAG 63299 0.38709906253889015 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 56094 0.343037564796545 Illumina Single End Adapter 1 (100% over 32bp) AAAAAAAAAAAAAAAAAAAAAAAAAAA 53269 0.32576154382192674 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAA 51491 0.314888352567813 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAA 48993 0.29961206924229206 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAA 48492 0.29654825100927124 Illumina Single End Adapter 1 (100% over 32bp) AAAAAAAAAAAAAAAAAAAAAAAAA 43731 0.2674328046870915 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 41602 0.25441310604816675 No Hit AAAAAAAAAAAAAAAAAAAAAAAA 38170 0.23342503384112603 No Hit ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG 33933 0.20751406008202594 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGA 32610 0.19942337840081528 No Hit ACTACTTCTCCCCCGGACTCCTTGGTAGTCTGTTAGTGGGAGATCCTTG 30545 0.18679506572379342 No Hit TCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 29413 0.17987242652263663 Illumina Single End Adapter 1 (100% over 31bp) ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAA 28517 0.17439302305599663 Illumina Single End Adapter 1 (100% over 32bp) ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGA 27941 0.17087054939887092 Illumina Single End Adapter 1 (100% over 32bp) ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 27818 0.17011835450333887 Illumina Single End Adapter 1 (100% over 32bp) AAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTCTTCTGCT 27501 0.16817977091078878 Illumina Single End Adapter 2 (100% over 32bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 27422 0.16769665386406493 No Hit AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG 25804 0.1578019275147083 No Hit AAGCAGTGGTATCAACGCAGAGTG 25192 0.15405929925401224 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGT 24034 0.14697765950583241 No Hit AGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 23036 0.14087448466240973 Illumina Single End Adapter 2 (100% over 34bp) AAGCAGTGGTATCAACGCAGAGTGCAGTGC 22422 0.1371196255904042 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAA 21653 0.13241687864191518 Illumina Single End Adapter 1 (100% over 32bp) AAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG 21426 0.13102868155829098 Illumina Single End Adapter 2 (100% over 34bp) ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGT 20891 0.1277569395330093 No Hit AAAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTT 20590 0.1259162024309349 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGGA 20587 0.1258978562139707 Illumina Single End Adapter 1 (100% over 32bp) CGGCAAGTTTGAATTTCGTGGAGGCTCGGG 20502 0.12537804673331845 No Hit AAGCAGTGGTATCAACGCAGATCGGAAGAGCTCGTATGCCGTCTTCTG 20462 0.1251334305071292 Illumina Single End Adapter 2 (100% over 30bp) AAGCAGTGGTATCAACGCAGAGCG 20368 0.12455858237558437 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGAC 20263 0.1239164647818375 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAG 20146 0.12320096232023384 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG 19129 0.11698159476937124 No Hit CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA 18889 0.11551389741223553 No Hit CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA 18880 0.11545885876134293 No Hit AAGCAGTGGTATCAACGCAGAGTGCAGTG 18841 0.11522035794080838 No Hit AAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTTCT 18734 0.11456600953575205 No Hit CTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG 18700 0.11435808574349114 No Hit ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAA 18289 0.11184465401939624 Illumina Single End Adapter 1 (100% over 32bp) AAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTTC 17937 0.10969203122893052 No Hit CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC 17677 0.10810202575870016 No Hit TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG 17589 0.10756387006108373 No Hit ACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTG 16750 0.10243304471676347 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.6926858831058555 0.0 0.0 0.0 0.0 2 1.717340446773191 0.0 0.0 0.0 0.0 3 2.329058359010393 0.0 0.0 0.0 0.0 4 2.7846193878540095 0.0 0.0 0.0 0.0 5 3.472235599672092 0.0 0.0 0.0 0.0 6 3.78095350793428 0.0 0.0 0.0 0.0 7 3.9895866872511223 0.0 0.0 0.0 0.0 8 4.161619163724392 0.0 0.0 0.0 0.0 9 4.2898714511154346 0.0 0.0 0.0 0.0 10 4.398248670128598 0.0 0.0 0.0 0.0 11 4.545629946407643 0.0 0.0 0.0 0.0 12 4.6320956669599 0.0 0.0 0.0 0.0 13 4.706165460250016 0.0 0.0 0.0 0.0 14 4.806317458657564 0.0 0.0 0.0 0.0 15 4.979842094110589 0.0 0.0 0.0 0.0 16 5.0535388476557666 0.0 0.0 0.0 0.0 17 5.145661318438651 0.0 0.0 0.0 0.0 18 5.2392881790126005 0.0 0.0 0.0 0.0 19 5.735241462205723 0.0 0.0 0.0 0.0 20 5.8135247699919494 0.0 0.0 0.0 0.0 21 6.0289093571516155 0.0 0.0 0.0 0.0 22 6.068610570662137 0.0 0.0 0.0 0.0 23 6.109192402586939 0.0 0.0 0.0 0.0 24 6.140760126576666 0.0 0.0 0.0 0.0 25 6.201015218492742 0.0 0.0 0.0 0.0 26 6.556577134070179 0.0 0.0 0.0 0.0 27 6.595899192430107 0.0 0.0 0.0 0.0 28 6.623394056253782 0.0 0.0 0.0 0.0 29 6.647464292910808 0.0 0.0 0.0 0.0 30 6.667541169675293 0.0 0.0 0.0 0.0 31 6.687526315354958 0.0 0.0 0.0 0.0 32 6.707590961308134 0.0 0.0 0.0 0.0 33 6.726762758035719 0.0 0.0 0.0 0.0 34 6.745261860141285 0.0 0.0 0.0 0.0 35 6.765577237726305 0.0 0.0 6.115405654732147E-6 0.0 36 6.782076602182772 0.0 0.0 6.115405654732147E-6 0.0 37 6.796374420603535 0.0 0.0 6.115405654732147E-6 0.0 38 6.805896107207953 6.726946220205362E-5 0.0 6.115405654732147E-6 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGTTCT 4245 0.0 115.42409 44 CTATACG 610 0.0 95.81774 44 AATCGCA 315 0.0 90.80196 44 ACGACAC 945 0.0 85.53807 44 ATCCTTG 7110 0.0 73.21534 43 TCGTGCG 5945 0.0 71.36328 43 TTCAGGA 4900 0.0 70.30102 44 CGTGCGC 4370 0.0 69.72083 44 AACGACA 1975 0.0 69.03771 43 CGCTACC 1750 0.0 68.2199 44 TCCTTGT 5995 0.0 67.83229 44 GACCGTA 290 0.0 64.32372 44 CATACAA 1070 0.0 60.436245 44 ACGCTAC 3170 0.0 58.842316 43 GTTCAGG 8910 0.0 57.91236 43 CTAAAAC 3410 0.0 57.673798 43 ACTTCTA 1800 0.0 57.34341 44 AATCCCG 2305 0.0 55.85525 43 CCTTAAC 2135 0.0 55.554493 43 TGTGTTA 5665 0.0 55.16044 42 >>END_MODULE